| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471488
Identifier: 13471488
GI number: 13471488
Start: 1225588
End: 1226124
Strand: Direct
Name: 13471488
Synonym: mlr1474
Alternate gene names: NA
Gene position: 1225588-1226124 (Clockwise)
Preceding gene: 13471487
Following gene: 13471489
Centisome position: 17.42
GC content: 63.69
Gene sequence:
>537_bases ATGGCCGACGACCACATCCGCTACGACATTCTGGCCCAGGAGGCGTTGCGCGGCGTCATGCGCAAGGTCCTGGCCGAGGT CGCACGCACCGGCCTCCCCGGCAACCATCATTTCTTCATCACCTTCCTGACCGGCGCGCCCGGCGTGCGCGTCTCGTCGC GTCTGCGCGAGCGCTATCCCGAGCAGATGACCATCGTCATCCAGTTCCAGTACTGGGACCTCAAGGTGACCGACACCGGC TTCGAGGTTGGCCTGTCCTTCTCCGACGTGCCGGAGAAACTGGAAATCCCATTCTCGGCCGTGCGTGGCTTCTACGATCC CTCGGTCAATTTCGAGCTTGAGTTCGACGTCAAGACCGATGCGCAGCCTGAAGAGGAACCGGCCCAGCCCGCGTCAGAGC CGTTGACCATCGTCTCCGAGAAGAAGCCGAAAGCCGAGAAAAAGGCTGCCGCCGAGCCGGAGAAGAAGCCCGCCGCGACC GAGGCCGGCGCCAAGGGCGCCGAAGTGGTTTCGCTCGACGCCTTCCGCAAGAAATAG
Upstream 100 bases:
>100_bases ATAGTCCTCGCTTCGACGCGACGGTGGGCTATATCAGGTTTACGCCGCGCTCAAGCTTGATTACAGCTATGCGGACGATT CAACGGAACCCGACCACCAC
Downstream 100 bases:
>100_bases GTTCGCGGTCCGCGCCATGGCCGACATCGTCAATCTCCGCCAGGCTCGCAAGCAGAAGGCGCGGGACGAGAAGACGCGCG TCGCCGAGCAGAACCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MADDHIRYDILAQEALRGVMRKVLAEVARTGLPGNHHFFITFLTGAPGVRVSSRLRERYPEQMTIVIQFQYWDLKVTDTG FEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKTDAQPEEEPAQPASEPLTIVSEKKPKAEKKAAAEPEKKPAAT EAGAKGAEVVSLDAFRKK
Sequences:
>Translated_178_residues MADDHIRYDILAQEALRGVMRKVLAEVARTGLPGNHHFFITFLTGAPGVRVSSRLRERYPEQMTIVIQFQYWDLKVTDTG FEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKTDAQPEEEPAQPASEPLTIVSEKKPKAEKKAAAEPEKKPAAT EAGAKGAEVVSLDAFRKK >Mature_177_residues ADDHIRYDILAQEALRGVMRKVLAEVARTGLPGNHHFFITFLTGAPGVRVSSRLRERYPEQMTIVIQFQYWDLKVTDTGF EVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKTDAQPEEEPAQPASEPLTIVSEKKPKAEKKAAAEPEKKPAATE AGAKGAEVVSLDAFRKK
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19824; Mature: 19692
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDHIRYDILAQEALRGVMRKVLAEVARTGLPGNHHFFITFLTGAPGVRVSSRLRERYP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCC EQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKTD CEEEEEEEEEEEEEEEECCCEEECCCCCCCCCHHCCCHHHHCCCCCCCCCEEEEEEECCC AQPEEEPAQPASEPLTIVSEKKPKAEKKAAAEPEKKPAATEAGAKGAEVVSLDAFRKK CCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHCC >Mature Secondary Structure ADDHIRYDILAQEALRGVMRKVLAEVARTGLPGNHHFFITFLTGAPGVRVSSRLRERYP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCC EQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKTD CEEEEEEEEEEEEEEEECCCEEECCCCCCCCCHHCCCHHHHCCCCCCCCCEEEEEEECCC AQPEEEPAQPASEPLTIVSEKKPKAEKKAAAEPEKKPAATEAGAKGAEVVSLDAFRKK CCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA