| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471432
Identifier: 13471432
GI number: 13471432
Start: 1171644
End: 1172441
Strand: Direct
Name: 13471432
Synonym: mlr1400
Alternate gene names: NA
Gene position: 1171644-1172441 (Clockwise)
Preceding gene: 13471430
Following gene: 13471434
Centisome position: 16.65
GC content: 64.04
Gene sequence:
>798_bases ATGGCAGCGCCCGACCAGACGGTTGTCGCGGTACGCGAGTTGCGACAGCAGCACCACCGTGCCGTCGAACAGCGCCGGCT TGACCGCTATCTCGCGCTGCCAGTTCTCGGCGATCGCCTCCGCATTTTCCCTGGCGAAAGGATGTGGGCCGGAATCAAGC CGGACGTCGATTGCATCGACCGGCAGGATGACATTGCGTGGCAGGTCGAAACTCATGCGTATCAGGTCCCAATCCTGCCT ATCGAGGCCAAATCTTGCCTATCGAGCCATGTCCAGCGTGATCGCCACCGGGCAATGGTCCGACGCTTTCGGCCGATCCC AGCCGGCGCGCGGAAAGCGCTCGACTTCCTGGCCGGCCGGAAAGATCGTGCGCCAGGGCTGGCCATTGCGGATGATGTCG GGAACGGCAGTGGCGTTCTTCGCCGCCAGCCCCTTGGACAGCAGGATATAGTCGAGCTGGCAGAGATGCCGCTCTTCGGG TCCGCGCGTGTGATAGAACGTCCAGCGGTCCATTTCCGGCCGACGCTCGATGACGTTCTCGCAGAAGCCGCCGGCCGTCA GCACGTTGATGCAGGACTGCGCCTCGTCGACCACCTCGAAACGGTAGCCGTCGACATCATCGCCGGTGATCTTCACGCGC TGGCGGTAATCATTCATGTCGCCACAGATCGCCCATCGCTTGTCGGCGGCATGATCCGGCGCACGGCTTGCGCCTCGGCG ATGCGCACCGGCATCGTCGCCTCGCGCCCGTCGAGCCCGTTGCGCGGCGAGCCCATCGACTTGAAATGCACGAGATAG
Upstream 100 bases:
>100_bases CACTGTCGCCGGCCACCAGCATGGCATGGGCATAGGCGTGCTCGGCGCCTGAATTCTCGCGCCGCTTCCGCCAAAGCATG AAGGTGGAGTAGTTGACCGC
Downstream 100 bases:
>100_bases AGCGTCAGCGGCACGCCGCCCACGGTGATGTCGACTTCCAGGCAGTCGCGCCGGAAGATGCGTTCATTGGCCTGGCTGCC GAGGGTCGCCAGTTCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MAAPDQTVVAVRELRQQHHRAVEQRRLDRYLALPVLGDRLRIFPGERMWAGIKPDVDCIDRQDDIAWQVETHAYQVPILP IEAKSCLSSHVQRDRHRAMVRRFRPIPAGARKALDFLAGRKDRAPGLAIADDVGNGSGVLRRQPLGQQDIVELAEMPLFG SARVIERPAVHFRPTLDDVLAEAAGRQHVDAGLRLVDHLETVAVDIIAGDLHALAVIIHVATDRPSLVGGMIRRTACASA MRTGIVASRPSSPLRGEPIDLKCTR
Sequences:
>Translated_265_residues MAAPDQTVVAVRELRQQHHRAVEQRRLDRYLALPVLGDRLRIFPGERMWAGIKPDVDCIDRQDDIAWQVETHAYQVPILP IEAKSCLSSHVQRDRHRAMVRRFRPIPAGARKALDFLAGRKDRAPGLAIADDVGNGSGVLRRQPLGQQDIVELAEMPLFG SARVIERPAVHFRPTLDDVLAEAAGRQHVDAGLRLVDHLETVAVDIIAGDLHALAVIIHVATDRPSLVGGMIRRTACASA MRTGIVASRPSSPLRGEPIDLKCTR >Mature_264_residues AAPDQTVVAVRELRQQHHRAVEQRRLDRYLALPVLGDRLRIFPGERMWAGIKPDVDCIDRQDDIAWQVETHAYQVPILPI EAKSCLSSHVQRDRHRAMVRRFRPIPAGARKALDFLAGRKDRAPGLAIADDVGNGSGVLRRQPLGQQDIVELAEMPLFGS ARVIERPAVHFRPTLDDVLAEAAGRQHVDAGLRLVDHLETVAVDIIAGDLHALAVIIHVATDRPSLVGGMIRRTACASAM RTGIVASRPSSPLRGEPIDLKCTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29258; Mature: 29127
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPDQTVVAVRELRQQHHRAVEQRRLDRYLALPVLGDRLRIFPGERMWAGIKPDVDCID CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEECCCCCCHHHCC RQDDIAWQVETHAYQVPILPIEAKSCLSSHVQRDRHRAMVRRFRPIPAGARKALDFLAGR CCCCEEEEEECCEEEECEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC KDRAPGLAIADDVGNGSGVLRRQPLGQQDIVELAEMPLFGSARVIERPAVHFRPTLDDVL CCCCCCCEEECCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHH AEAAGRQHVDAGLRLVDHLETVAVDIIAGDLHALAVIIHVATDRPSLVGGMIRRTACASA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MRTGIVASRPSSPLRGEPIDLKCTR HHHCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure AAPDQTVVAVRELRQQHHRAVEQRRLDRYLALPVLGDRLRIFPGERMWAGIKPDVDCID CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEECCCCCCHHHCC RQDDIAWQVETHAYQVPILPIEAKSCLSSHVQRDRHRAMVRRFRPIPAGARKALDFLAGR CCCCEEEEEECCEEEECEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC KDRAPGLAIADDVGNGSGVLRRQPLGQQDIVELAEMPLFGSARVIERPAVHFRPTLDDVL CCCCCCCEEECCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHH AEAAGRQHVDAGLRLVDHLETVAVDIIAGDLHALAVIIHVATDRPSLVGGMIRRTACASA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MRTGIVASRPSSPLRGEPIDLKCTR HHHCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA