| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471434
Identifier: 13471434
GI number: 13471434
Start: 1173180
End: 1173779
Strand: Direct
Name: 13471434
Synonym: mlr1403
Alternate gene names: NA
Gene position: 1173180-1173779 (Clockwise)
Preceding gene: 13471432
Following gene: 13471438
Centisome position: 16.67
GC content: 62.5
Gene sequence:
>600_bases ATGAACTCGCTCTTTTCATCCACGGTCAAATCGGGGCTTGTCGCCCTGGGCATCGTTTCAGGCATCACGGCGCCATCCGC TGCCGGACCGATCATGCAACCGGACCTGTCGCTTCCCACAAGCACGGCGGCGCCGACGGTCACGCCGGTCCGCGAAGAAT GGGCGGGCGGTAATGACCGCCAATTCTCCAACGACAATTGGAGATGGCGCCGGTCAGGCAATTGGAACGGTGGTCGGCGC TGGAATGGTGGGGGCAACTGGAACGGTGGGGGCAACTGGAACCGCGGAAACTGGAATCGTGGAAACTGGGACCGCGGCGA TGACTGGCGTTGGCGTCGCCATCATCACCGCTCCTATGATGACAGTGCGGGTGCCGCGATCCTTGGCCTTGGCCTGGGGC TTGGCCTCGGCAGCATGTACAACAACTACAACAACTACGATTACTATGCGCCAGCACCGCGCCGCTACTACCGCGCCGGG CGGCTTTCGAATGCCCATGTCCGGTGGTGCTATAACCGCTACCGGTCGTATCGCGCCTGGGACAACACGTTCCAGCCCTA TGGCGGCCCGCGCCAGCAATGCTGGTCGCCCTATAGCTGA
Upstream 100 bases:
>100_bases GGTTGACGGAACCTTTCCGTTCATCCGCCGTTCAGACGCAAAGATCCACAGTAGGCCCATTCCAGGGTAGGCGTGGGGCC TTTAGCTGTTGGAGAGTGTT
Downstream 100 bases:
>100_bases GCAGCAGTAAACGTAGCTAAAATGAAAACGGCGCCCTGGTGGCGCCGTTTTGCTCTGATCAAGAAGAACGGATTTCGCTC AGTTCTTGGCCTTGTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MNSLFSSTVKSGLVALGIVSGITAPSAAGPIMQPDLSLPTSTAAPTVTPVREEWAGGNDRQFSNDNWRWRRSGNWNGGRR WNGGGNWNGGGNWNRGNWNRGNWDRGDDWRWRRHHHRSYDDSAGAAILGLGLGLGLGSMYNNYNNYDYYAPAPRRYYRAG RLSNAHVRWCYNRYRSYRAWDNTFQPYGGPRQQCWSPYS
Sequences:
>Translated_199_residues MNSLFSSTVKSGLVALGIVSGITAPSAAGPIMQPDLSLPTSTAAPTVTPVREEWAGGNDRQFSNDNWRWRRSGNWNGGRR WNGGGNWNGGGNWNRGNWNRGNWDRGDDWRWRRHHHRSYDDSAGAAILGLGLGLGLGSMYNNYNNYDYYAPAPRRYYRAG RLSNAHVRWCYNRYRSYRAWDNTFQPYGGPRQQCWSPYS >Mature_199_residues MNSLFSSTVKSGLVALGIVSGITAPSAAGPIMQPDLSLPTSTAAPTVTPVREEWAGGNDRQFSNDNWRWRRSGNWNGGRR WNGGGNWNGGGNWNRGNWNRGNWDRGDDWRWRRHHHRSYDDSAGAAILGLGLGLGLGSMYNNYNNYDYYAPAPRRYYRAG RLSNAHVRWCYNRYRSYRAWDNTFQPYGGPRQQCWSPYS
Specific function: Has immunoglobulin-binding and hemagglutination properties, and can bind to mannose. Essential for virulence. May be involved in LPS biosynthesis or polysaccharide transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BA14k family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012413 [H]
Pfam domain/function: PF07886 BA14K [H]
EC number: NA
Molecular weight: Translated: 22658; Mature: 22658
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLFSSTVKSGLVALGIVSGITAPSAAGPIMQPDLSLPTSTAAPTVTPVREEWAGGNDR CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC QFSNDNWRWRRSGNWNGGRRWNGGGNWNGGGNWNRGNWNRGNWDRGDDWRWRRHHHRSYD CCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC DSAGAAILGLGLGLGLGSMYNNYNNYDYYAPAPRRYYRAGRLSNAHVRWCYNRYRSYRAW CCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHCC DNTFQPYGGPRQQCWSPYS CCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MNSLFSSTVKSGLVALGIVSGITAPSAAGPIMQPDLSLPTSTAAPTVTPVREEWAGGNDR CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC QFSNDNWRWRRSGNWNGGRRWNGGGNWNGGGNWNRGNWNRGNWDRGDDWRWRRHHHRSYD CCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC DSAGAAILGLGLGLGLGSMYNNYNNYDYYAPAPRRYYRAGRLSNAHVRWCYNRYRSYRAW CCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHCC DNTFQPYGGPRQQCWSPYS CCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA