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The map label for this gene is yfjY [C]

Identifier: 13471142

GI number: 13471142

Start: 868558

End: 868758

Strand: Direct

Name: yfjY [C]

Synonym: msr1029

Alternate gene names: 13471142

Gene position: 868558-868758 (Clockwise)

Preceding gene: 13471138

Following gene: 13471143

Centisome position: 12.34

GC content: 57.21

Gene sequence:

>201_bases
GTGATTGATAACTATTGCGAATATGGCCTCGGTAGTTTGATGCACAACCACCCGTCAGGCGATCCGACGCCATCGCGCGC
CGACATCGAGATGACGAAAGAGATCATCGAAGCGGGCAAACGGCTGGGCATCGCCGTGCACGACCACATCATCATCGGCC
GCAAGGGATACGCCAGCATGAAGGGCCTGCTGCTGATCTAG

Upstream 100 bases:

>100_bases
GTACCGAGCGGATGCGATTGTGACCAAGCGTGAAGATCACAAACGGTCATTTGATACATGCCCCAGTCGACGGCACCACC
CTTCCCTCACTTGATCACAA

Downstream 100 bases:

>100_bases
GGCGACGACCAATATGGCGGCCAGGTCGTCTTCGCCGAGAGGAAAGCCAGGGCGTTCCCGCTTGATGCATCGACCAGGCT
TTCGTTATCGACTTCCCGTA

Product: DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MIDNYCEYGLGSLMHNHPSGDPTPSRADIEMTKEIIEAGKRLGIAVHDHIIIGRKGYASMKGLLLI

Sequences:

>Translated_66_residues
MIDNYCEYGLGSLMHNHPSGDPTPSRADIEMTKEIIEAGKRLGIAVHDHIIIGRKGYASMKGLLLI
>Mature_66_residues
MIDNYCEYGLGSLMHNHPSGDPTPSRADIEMTKEIIEAGKRLGIAVHDHIIIGRKGYASMKGLLLI

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 7250; Mature: 7250

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDNYCEYGLGSLMHNHPSGDPTPSRADIEMTKEIIEAGKRLGIAVHDHIIIGRKGYASM
CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCEEEECCCCCCCC
KGLLLI
CCEEEC
>Mature Secondary Structure
MIDNYCEYGLGSLMHNHPSGDPTPSRADIEMTKEIIEAGKRLGIAVHDHIIIGRKGYASM
CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCEEEECCCCCCCC
KGLLLI
CCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]