Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471143
Identifier: 13471143
GI number: 13471143
Start: 869119
End: 869898
Strand: Direct
Name: 13471143
Synonym: mlr1030
Alternate gene names: NA
Gene position: 869119-869898 (Clockwise)
Preceding gene: 13471142
Following gene: 13471149
Centisome position: 12.35
GC content: 64.87
Gene sequence:
>780_bases ATGACAAACCGAAAAACTCTGTTCGCCGCGCTTGCCGCATTGGCGCTTCTGGCGTCGCCGGCGCTCGCCGGCAACGGGAA CGGCGGCGGCAATGGCGGCGGCCACGGCAACGGTGGCGGCCATGGCAATGGCGGCGGCAATGCTGGCAGCAACGGCAAAG GCAACAGCGGTGCCTCGCATGGCAAATCCGCGTCGGCCCCGGGACAAGTTGGCAAGGTGGACGCTGACGCAACAGCCGAC ACCACGGTCGACACGACCACCCAGGTCTCATCCGTGTCGAAGGAGAAAAACATCCATGCCAAGCTCGGCCGGCTGAATTC GCTGCAGCGCAACGTCAACGCCTACATGAATTCCAAGAGCAAGAAGTTCGCTGGCCTCCAGGCCTTCGTGACACAGTCCG CGAAAGCCAAGGTCGCCCAGGCCGCGGCCGAGACGGCAGCCGCCACGGCCGCCGCCGCGCAGGCCCAACTGGATACGTTG AATGCCAAGTTGACCGCGCTGCAGGCTGATCCGACCGCCACGGCTGCGCAGATCCAAGATGTGAAGGATCAGATCACCGC CCAGCAGGCCGTTGTCGACGCCGATAATGCAGCGGCCGACCAGGCAGAGGCGAAGGCAGCCACGGCGACCGTCGGCACCG ACCCGGCATCGCTCGATGCAGCGCTGACGGATATGGCCAACAAGCCGGTCGATGACGAGGTCACGGCCTGGGCCCAGGGT GTCCTTGCCGACAAGATCGACCAGATGGCTACCAAGATCGAAGCGCAGACGACGCCTTAG
Upstream 100 bases:
>100_bases GACCGCATTTGTCTAAAGTTTACTCCGTACGATTAGTGGATTCTCATATTACGCTGATCTAGCTCGGTTGGGCGGAGGCG GCGATTCCCGAGGAGACACC
Downstream 100 bases:
>100_bases GCGTCGACTGAAACGGTAGTAGCCAAAGGCCGCCGAGCTCCCGCCCGGCGGCTGAAGACATGGCACTGCCAGAGCCGCCC GTCAGCCGCCGAAGCGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTNRKTLFAALAALALLASPALAGNGNGGGNGGGHGNGGGHGNGGGNAGSNGKGNSGASHGKSASAPGQVGKVDADATAD TTVDTTTQVSSVSKEKNIHAKLGRLNSLQRNVNAYMNSKSKKFAGLQAFVTQSAKAKVAQAAAETAAATAAAAQAQLDTL NAKLTALQADPTATAAQIQDVKDQITAQQAVVDADNAAADQAEAKAATATVGTDPASLDAALTDMANKPVDDEVTAWAQG VLADKIDQMATKIEAQTTP
Sequences:
>Translated_259_residues MTNRKTLFAALAALALLASPALAGNGNGGGNGGGHGNGGGHGNGGGNAGSNGKGNSGASHGKSASAPGQVGKVDADATAD TTVDTTTQVSSVSKEKNIHAKLGRLNSLQRNVNAYMNSKSKKFAGLQAFVTQSAKAKVAQAAAETAAATAAAAQAQLDTL NAKLTALQADPTATAAQIQDVKDQITAQQAVVDADNAAADQAEAKAATATVGTDPASLDAALTDMANKPVDDEVTAWAQG VLADKIDQMATKIEAQTTP >Mature_258_residues TNRKTLFAALAALALLASPALAGNGNGGGNGGGHGNGGGHGNGGGNAGSNGKGNSGASHGKSASAPGQVGKVDADATADT TVDTTTQVSSVSKEKNIHAKLGRLNSLQRNVNAYMNSKSKKFAGLQAFVTQSAKAKVAQAAAETAAATAAAAQAQLDTLN AKLTALQADPTATAAQIQDVKDQITAQQAVVDADNAAADQAEAKAATATVGTDPASLDAALTDMANKPVDDEVTAWAQGV LADKIDQMATKIEAQTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25560; Mature: 25429
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRKTLFAALAALALLASPALAGNGNGGGNGGGHGNGGGHGNGGGNAGSNGKGNSGASH CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKSASAPGQVGKVDADATADTTVDTTTQVSSVSKEKNIHAKLGRLNSLQRNVNAYMNSKS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH KKFAGLQAFVTQSAKAKVAQAAAETAAATAAAAQAQLDTLNAKLTALQADPTATAAQIQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHH VKDQITAQQAVVDADNAAADQAEAKAATATVGTDPASLDAALTDMANKPVDDEVTAWAQG HHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHH VLADKIDQMATKIEAQTTP HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNRKTLFAALAALALLASPALAGNGNGGGNGGGHGNGGGHGNGGGNAGSNGKGNSGASH CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKSASAPGQVGKVDADATADTTVDTTTQVSSVSKEKNIHAKLGRLNSLQRNVNAYMNSKS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH KKFAGLQAFVTQSAKAKVAQAAAETAAATAAAAQAQLDTLNAKLTALQADPTATAAQIQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHH VKDQITAQQAVVDADNAAADQAEAKAATATVGTDPASLDAALTDMANKPVDDEVTAWAQG HHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHH VLADKIDQMATKIEAQTTP HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA