Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471069
Identifier: 13471069
GI number: 13471069
Start: 761374
End: 761853
Strand: Reverse
Name: 13471069
Synonym: mll0946
Alternate gene names: NA
Gene position: 761853-761374 (Counterclockwise)
Preceding gene: 13471070
Following gene: 13471066
Centisome position: 10.83
GC content: 61.25
Gene sequence:
>480_bases GTGTTCGGTAGGGCGTCTCACCGTTTCGCGGAAATGGCGAAGCGCCCTAGCTCTTCGTTTTGCCGCGATCCCCGGTATTG CGCTGGGGCAAGCGCCTTCAGGCGGGATCGATCGGGCGGGGCCGGGCTGGAGTTCGCACTGATCGCGCCGTTCCTTATCA TATTGCTGTTCGGGATCTTCGCCTTGGGCTGGTCGATGCATTCGGTGTCCAGCGTTCGCTATACGCTGGAGACATCATCG CGCTCGCTGCAGCTTCAGAACACGCTGACCCAAGCCGACATCCAATCGATCGCCACGCAGAAATTGCAGGCCTTGGGCTT GAAGGATGTGAACGTGACGATCGCCGTCGACCCGGCGAGCGGCGGCTTCCGCATGGCGCATCTGACCGCCACCTATGCCT TCGTCGTCGATTTTCCTTACCTCAGCAGCTTTCCGATCAACTACGCCACCACCGTCACCGTGCCGCTGGTCGGCGGTTAG
Upstream 100 bases:
>100_bases TCGGTCTATGTTCAGATCCAGGCATCGGCCACCTGGACGCCGCCCTTCACCTTCGGCGTCTTTTCCGCTTCCAGCGTCAT CGGCCATCTGGAGGTGATCC
Downstream 100 bases:
>100_bases TCGATACGGCGCAGACGCTGGCTTGCGCGTTTCAGCCTGCATGGTCCAGCAGTCTTGTTGTGGCGTCACGGCGATGTTCG GAATTGGCGCGATCGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MFGRASHRFAEMAKRPSSSFCRDPRYCAGASAFRRDRSGGAGLEFALIAPFLIILLFGIFALGWSMHSVSSVRYTLETSS RSLQLQNTLTQADIQSIATQKLQALGLKDVNVTIAVDPASGGFRMAHLTATYAFVVDFPYLSSFPINYATTVTVPLVGG
Sequences:
>Translated_159_residues MFGRASHRFAEMAKRPSSSFCRDPRYCAGASAFRRDRSGGAGLEFALIAPFLIILLFGIFALGWSMHSVSSVRYTLETSS RSLQLQNTLTQADIQSIATQKLQALGLKDVNVTIAVDPASGGFRMAHLTATYAFVVDFPYLSSFPINYATTVTVPLVGG >Mature_159_residues MFGRASHRFAEMAKRPSSSFCRDPRYCAGASAFRRDRSGGAGLEFALIAPFLIILLFGIFALGWSMHSVSSVRYTLETSS RSLQLQNTLTQADIQSIATQKLQALGLKDVNVTIAVDPASGGFRMAHLTATYAFVVDFPYLSSFPINYATTVTVPLVGG
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17235; Mature: 17235
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRASHRFAEMAKRPSSSFCRDPRYCAGASAFRRDRSGGAGLEFALIAPFLIILLFGIF CCCCHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ALGWSMHSVSSVRYTLETSSRSLQLQNTLTQADIQSIATQKLQALGLKDVNVTIAVDPAS HHCCCHHHHHHEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC GGFRMAHLTATYAFVVDFPYLSSFPINYATTVTVPLVGG CCEEEEHHHHHEEEEEECCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MFGRASHRFAEMAKRPSSSFCRDPRYCAGASAFRRDRSGGAGLEFALIAPFLIILLFGIF CCCCHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ALGWSMHSVSSVRYTLETSSRSLQLQNTLTQADIQSIATQKLQALGLKDVNVTIAVDPAS HHCCCHHHHHHEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC GGFRMAHLTATYAFVVDFPYLSSFPINYATTVTVPLVGG CCEEEEHHHHHEEEEEECCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA