Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471070
Identifier: 13471070
GI number: 13471070
Start: 761843
End: 762277
Strand: Reverse
Name: 13471070
Synonym: mll0947
Alternate gene names: NA
Gene position: 762277-761843 (Counterclockwise)
Preceding gene: 13471071
Following gene: 13471069
Centisome position: 10.83
GC content: 62.99
Gene sequence:
>435_bases ATGGAACGCGGATCAATCCTTGGCGACCGTTCTGGCGTTGCCGCGGTCGAGTTCGCCATGGTCCTGCCCTTCCTGTGCGC GGCGCTGCTCGGCATCATCGACGGCTGGTCCTATGTGACGAGCTCACTGTCGATGCGCGCCGGCGTCAAGACCGCCGCGA ACCTGATCATGGAAGGATCGACCAATGACACGGCGACGCAGGCCGTTGCCATGTCGAGTTGGGAGAAGCGGCCGACGGAC GGCCAGGTCACGCTAAGCCGGATCTATATGTGCGGGACGACCGTGGTCGACGCCTCCACTTTGTGCAGCGGACCAAAGGT GCCGTCGGTCTATGTTCAGATCCAGGCATCGGCCACCTGGACGCCGCCCTTCACCTTCGGCGTCTTTTCCGCTTCCAGCG TCATCGGCCATCTGGAGGTGATCCGTGTTCGGTAG
Upstream 100 bases:
>100_bases CCAATGGTCTGGGAATTCAACCATCAATCAGGATTGCACGAGCCTCGGAATGCGAGACATTCCGGCCACGCAGTCCGTGG CACTGGTCGAGTAGGCTTCC
Downstream 100 bases:
>100_bases GGCGTCTCACCGTTTCGCGGAAATGGCGAAGCGCCCTAGCTCTTCGTTTTGCCGCGATCCCCGGTATTGCGCTGGGGCAA GCGCCTTCAGGCGGGATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MERGSILGDRSGVAAVEFAMVLPFLCAALLGIIDGWSYVTSSLSMRAGVKTAANLIMEGSTNDTATQAVAMSSWEKRPTD GQVTLSRIYMCGTTVVDASTLCSGPKVPSVYVQIQASATWTPPFTFGVFSASSVIGHLEVIRVR
Sequences:
>Translated_144_residues MERGSILGDRSGVAAVEFAMVLPFLCAALLGIIDGWSYVTSSLSMRAGVKTAANLIMEGSTNDTATQAVAMSSWEKRPTD GQVTLSRIYMCGTTVVDASTLCSGPKVPSVYVQIQASATWTPPFTFGVFSASSVIGHLEVIRVR >Mature_144_residues MERGSILGDRSGVAAVEFAMVLPFLCAALLGIIDGWSYVTSSLSMRAGVKTAANLIMEGSTNDTATQAVAMSSWEKRPTD GQVTLSRIYMCGTTVVDASTLCSGPKVPSVYVQIQASATWTPPFTFGVFSASSVIGHLEVIRVR
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15227; Mature: 15227
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERGSILGDRSGVAAVEFAMVLPFLCAALLGIIDGWSYVTSSLSMRAGVKTAANLIMEGS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHEECCC TNDTATQAVAMSSWEKRPTDGQVTLSRIYMCGTTVVDASTLCSGPKVPSVYVQIQASATW CCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHCHHHHCCCCCCCEEEEEEEECCEE TPPFTFGVFSASSVIGHLEVIRVR CCCCHHHHHHHHHHHCEEEEEEEC >Mature Secondary Structure MERGSILGDRSGVAAVEFAMVLPFLCAALLGIIDGWSYVTSSLSMRAGVKTAANLIMEGS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHEECCC TNDTATQAVAMSSWEKRPTDGQVTLSRIYMCGTTVVDASTLCSGPKVPSVYVQIQASATW CCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHCHHHHCCCCCCCEEEEEEEECCEE TPPFTFGVFSASSVIGHLEVIRVR CCCCHHHHHHHHHHHCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA