Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is yyaP [H]
Identifier: 13471055
GI number: 13471055
Start: 747214
End: 747780
Strand: Direct
Name: yyaP [H]
Synonym: mlr0926
Alternate gene names: 13471055
Gene position: 747214-747780 (Clockwise)
Preceding gene: 13471054
Following gene: 13471063
Centisome position: 10.62
GC content: 62.61
Gene sequence:
>567_bases ATGGCCAAAATCGTCTATTCCATGCTCACCTCTTTGGACGGCTACATCGCCGGGCCGGACGGGGACATTGGCCTGCCGGT GCCCGAAACGGAATTGCACCAGCACTTCAACGACATGATGAGGCAAGCGTCGGCAGTCCTTGCCGGCCGGCGGATGTACG AGACGATGCGCTTCTGGGACAGCCCTGACCGCGAGACCGGCGCCACCGAGGTCGAACGGGATTTTGCCGACGCCTGGCGG GATACACCGAAGATCGTGTTCTCGACCACGCTTCGGCAGGTCGGGTCCAATGCCCGGCTGGTGAATGGCGATGCCGAGAC CGCAGTAAGATCGCTCAAGACGAAAACGGATGGCCTCGTCATCCTCGGTGGGGCCGATCTTGCCGCAGATCTGACACGAG CCGGGCTCATCGACGAATACCGGCTGTACATGCATCCGGTCGTGCTGGGTGGCGGCAAGCCATACTTCCAGTCCGGCCTG TCGCTGGCGTTGAAACCGCTTGGCACGGAAAGCCTGCCCCAGGGCGTGACGCTGCTGCGTTATGCGCCGGCCAACCAAGC TGCATAG
Upstream 100 bases:
>100_bases CTTGAAGCGTGCGGCAATTCCGTATTGCCGTGCTCGCGATACCTGATTGCAAAATGCAATTGGTTATGCTGGTCTGTGCC CACTATACGGAGGCACACTG
Downstream 100 bases:
>100_bases ATACTGACGCAGCTACGACCGCGCCGCATCGACGATACGGAATTGCACCGTGCGGTTGCCGTTCCAGTAATTGCCCGACA GCGAGCCGGCGACATGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAKIVYSMLTSLDGYIAGPDGDIGLPVPETELHQHFNDMMRQASAVLAGRRMYETMRFWDSPDRETGATEVERDFADAWR DTPKIVFSTTLRQVGSNARLVNGDAETAVRSLKTKTDGLVILGGADLAADLTRAGLIDEYRLYMHPVVLGGGKPYFQSGL SLALKPLGTESLPQGVTLLRYAPANQAA
Sequences:
>Translated_188_residues MAKIVYSMLTSLDGYIAGPDGDIGLPVPETELHQHFNDMMRQASAVLAGRRMYETMRFWDSPDRETGATEVERDFADAWR DTPKIVFSTTLRQVGSNARLVNGDAETAVRSLKTKTDGLVILGGADLAADLTRAGLIDEYRLYMHPVVLGGGKPYFQSGL SLALKPLGTESLPQGVTLLRYAPANQAA >Mature_187_residues AKIVYSMLTSLDGYIAGPDGDIGLPVPETELHQHFNDMMRQASAVLAGRRMYETMRFWDSPDRETGATEVERDFADAWRD TPKIVFSTTLRQVGSNARLVNGDAETAVRSLKTKTDGLVILGGADLAADLTRAGLIDEYRLYMHPVVLGGGKPYFQSGLS LALKPLGTESLPQGVTLLRYAPANQAA
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywjB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002734 [H]
Pfam domain/function: PF01872 RibD_C [H]
EC number: NA
Molecular weight: Translated: 20461; Mature: 20329
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIVYSMLTSLDGYIAGPDGDIGLPVPETELHQHFNDMMRQASAVLAGRRMYETMRFWD CHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPDRETGATEVERDFADAWRDTPKIVFSTTLRQVGSNARLVNGDAETAVRSLKTKTDGLV CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCEE ILGGADLAADLTRAGLIDEYRLYMHPVVLGGGKPYFQSGLSLALKPLGTESLPQGVTLLR EECCCHHHHHHHHHCCHHHHHHHHCEEEECCCCHHHHHCHHHHHCCCCCCCCCCCCEEEE YAPANQAA ECCCCCCC >Mature Secondary Structure AKIVYSMLTSLDGYIAGPDGDIGLPVPETELHQHFNDMMRQASAVLAGRRMYETMRFWD HHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPDRETGATEVERDFADAWRDTPKIVFSTTLRQVGSNARLVNGDAETAVRSLKTKTDGLV CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCEE ILGGADLAADLTRAGLIDEYRLYMHPVVLGGGKPYFQSGLSLALKPLGTESLPQGVTLLR EECCCHHHHHHHHHCCHHHHHHHHCEEEECCCCHHHHHCHHHHHCCCCCCCCCCCCEEEE YAPANQAA ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]