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The map label for this gene is rssA [H]

Identifier: 13471054

GI number: 13471054

Start: 746079

End: 747053

Strand: Direct

Name: rssA [H]

Synonym: mlr0925

Alternate gene names: 13471054

Gene position: 746079-747053 (Clockwise)

Preceding gene: 13471053

Following gene: 13471055

Centisome position: 10.6

GC content: 64.41

Gene sequence:

>975_bases
ATGATGCTCGAGTGGGCGTCATTGCGGAACAGACCAGATGTCAGGGAGGCCAACGGCCTGACCTCTTCCGGCGGCACGTC
CGAAACGAAATCTCCCAAGAAGACAGGCATTTCGCTCGCTTTGGGCGGCGGTTGCGCCAGGGGCTGGGCTCATATCGGCG
TGCTTCGCGCGCTCGACGAGGCCGGCATCGAAGTTTCGATGATCGCCGGCACCTCGATCGGCGCGCTGGTCGGCGGCTGT
TATCTCGCCGGCAAACTGGATGAGCTGGAAGAGTTCGCCCGCAGCCTCACCAAGCGGCGCATTTTTGGCCTGCTCGATCT
CAATCTGCGCGGCAGCGGCCTGTTCGGCGGCATGAAACTCGATGCCCGTCTGCGCGAGCATGTGGCGGGCGTCCGTTTCG
AGGACCTGCCAAAACCCTTCGTCAGCGTCGCATCGGAAATCCGCACCGGCCACGAGATCTGGCTGTCGAACGGCTCGCTG
ATCACAGCCATGCGCGCGTCCTACGCATTGCCTGGCGTGTTCGAGCCGGTGAACTGCAACGGCCGCATGCTGGTCGACGG
CGCGCTGGTCAATCCGGTTCCGGTGTCCGTCTGCCGCGCCTACGAGCAGCCGCTCGTCGTGGCGGTCAACCTTCATTACG
ACCTGTTCGGCCGCGCGGCCGTGATCAAACACAGCGCCGGCGAACTGGTTGTCGAAAAGGATGCGCCGCGCCCCGGCCAT
GTTGGCGCCGAGTACCAGTCACATCAGACACGCCTCGGCATCACCGGCGTCATGGTCGAGGCCTTCAACATCATCCAGGA
CCGCATCTCGCGCGCCAGGCTTGCCGGCGATCCGCCCGACATGTCGCTGCAGCCCAAACTCAGCCATATCGGCCTCACCG
AGTTCCATCGCGCCGACGAGGCGATCCAGATCGGTTACCAGGCAACGACGGCGCAGATCGGCGAACTGACCCGGCTGCAG
ACCGTTCTCGCCTGA

Upstream 100 bases:

>100_bases
TCGGAAGCCATCGTCTTGAACCATCTGCCTCACGCCAACCACACAGATTCATCATTTCGATACGGCCTGTCCGTATATTA
GTCTTGGGACAAGGGAGATC

Downstream 100 bases:

>100_bases
GGCCAGCCATCCCCTGAAAAACACCGTGCGTTGCGTCCCATCGACGGAAGACGCCGCACCCTTGAAGCGTGCGGCAATTC
CGTATTGCCGTGCTCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MMLEWASLRNRPDVREANGLTSSGGTSETKSPKKTGISLALGGGCARGWAHIGVLRALDEAGIEVSMIAGTSIGALVGGC
YLAGKLDELEEFARSLTKRRIFGLLDLNLRGSGLFGGMKLDARLREHVAGVRFEDLPKPFVSVASEIRTGHEIWLSNGSL
ITAMRASYALPGVFEPVNCNGRMLVDGALVNPVPVSVCRAYEQPLVVAVNLHYDLFGRAAVIKHSAGELVVEKDAPRPGH
VGAEYQSHQTRLGITGVMVEAFNIIQDRISRARLAGDPPDMSLQPKLSHIGLTEFHRADEAIQIGYQATTAQIGELTRLQ
TVLA

Sequences:

>Translated_324_residues
MMLEWASLRNRPDVREANGLTSSGGTSETKSPKKTGISLALGGGCARGWAHIGVLRALDEAGIEVSMIAGTSIGALVGGC
YLAGKLDELEEFARSLTKRRIFGLLDLNLRGSGLFGGMKLDARLREHVAGVRFEDLPKPFVSVASEIRTGHEIWLSNGSL
ITAMRASYALPGVFEPVNCNGRMLVDGALVNPVPVSVCRAYEQPLVVAVNLHYDLFGRAAVIKHSAGELVVEKDAPRPGH
VGAEYQSHQTRLGITGVMVEAFNIIQDRISRARLAGDPPDMSLQPKLSHIGLTEFHRADEAIQIGYQATTAQIGELTRLQ
TVLA
>Mature_324_residues
MMLEWASLRNRPDVREANGLTSSGGTSETKSPKKTGISLALGGGCARGWAHIGVLRALDEAGIEVSMIAGTSIGALVGGC
YLAGKLDELEEFARSLTKRRIFGLLDLNLRGSGLFGGMKLDARLREHVAGVRFEDLPKPFVSVASEIRTGHEIWLSNGSL
ITAMRASYALPGVFEPVNCNGRMLVDGALVNPVPVSVCRAYEQPLVVAVNLHYDLFGRAAVIKHSAGELVVEKDAPRPGH
VGAEYQSHQTRLGITGVMVEAFNIIQDRISRARLAGDPPDMSLQPKLSHIGLTEFHRADEAIQIGYQATTAQIGELTRLQ
TVLA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656043, Length=183, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI260656041, Length=183, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI116256487, Length=183, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI260656039, Length=183, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI260656037, Length=183, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI148727335, Length=188, Percent_Identity=33.5106382978723, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI148727290, Length=188, Percent_Identity=33.5106382978723, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI226510936, Length=295, Percent_Identity=37.2881355932203, Blast_Score=201, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI71997289, Length=171, Percent_Identity=32.7485380116959, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71997299, Length=171, Percent_Identity=32.7485380116959, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193204778, Length=165, Percent_Identity=26.0606060606061, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=182, Percent_Identity=32.967032967033, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281376913, Length=185, Percent_Identity=34.0540540540541, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571388, Length=185, Percent_Identity=33.5135135135135, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 34802; Mature: 34802

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLEWASLRNRPDVREANGLTSSGGTSETKSPKKTGISLALGGGCARGWAHIGVLRALDE
CCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHH
AGIEVSMIAGTSIGALVGGCYLAGKLDELEEFARSLTKRRIFGLLDLNLRGSGLFGGMKL
CCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEH
DARLREHVAGVRFEDLPKPFVSVASEIRTGHEIWLSNGSLITAMRASYALPGVFEPVNCN
HHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCEEEEEHHHHCCCCCCCCCCCC
GRMLVDGALVNPVPVSVCRAYEQPLVVAVNLHYDLFGRAAVIKHSAGELVVEKDAPRPGH
CEEEECCCCCCCCHHHHHHHCCCCEEEEEEECHHHHCCEEEEEECCCCEEEECCCCCCCC
VGAEYQSHQTRLGITGVMVEAFNIIQDRISRARLAGDPPDMSLQPKLSHIGLTEFHRADE
CCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHCCC
AIQIGYQATTAQIGELTRLQTVLA
CEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMLEWASLRNRPDVREANGLTSSGGTSETKSPKKTGISLALGGGCARGWAHIGVLRALDE
CCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHH
AGIEVSMIAGTSIGALVGGCYLAGKLDELEEFARSLTKRRIFGLLDLNLRGSGLFGGMKL
CCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEH
DARLREHVAGVRFEDLPKPFVSVASEIRTGHEIWLSNGSLITAMRASYALPGVFEPVNCN
HHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCEEEEEHHHHCCCCCCCCCCCC
GRMLVDGALVNPVPVSVCRAYEQPLVVAVNLHYDLFGRAAVIKHSAGELVVEKDAPRPGH
CEEEECCCCCCCCHHHHHHHCCCCEEEEEEECHHHHCCEEEEEECCCCEEEECCCCCCCC
VGAEYQSHQTRLGITGVMVEAFNIIQDRISRARLAGDPPDMSLQPKLSHIGLTEFHRADE
CCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHCCC
AIQIGYQATTAQIGELTRLQTVLA
CEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]