Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is aaeB [H]
Identifier: 13471035
GI number: 13471035
Start: 726540
End: 728606
Strand: Direct
Name: aaeB [H]
Synonym: mlr0902
Alternate gene names: 13471035
Gene position: 726540-728606 (Clockwise)
Preceding gene: 13471034
Following gene: 13471037
Centisome position: 10.33
GC content: 65.75
Gene sequence:
>2067_bases GTGACCTGGGCGCGGCTGAAAGCCTATTTCGAGACGAGCCTGGCCGGGTTGACGCAGCCGACGCGCTCGGACTGGATTTT CGCCCTGCGCACCGTTTCGGCCGGCCTGATTGCGCTGCTTGCCGCCTATGCCCTCAAGCTCGACCACCCGCAATGGGCGA TGATGACGGTGTTCATCGTCGCCCAGCCTGTCGCGGGTATGGTGCTGGCGAAGGGTTTCTACCGGTTGCTCGGCACGCTG GCCGGCGGGCTGGCGGCGATCGGCATCACCACTGTCTTCGGCACCAACCCATGGGTTCTGGTGACGGTGCTCGCCGTCTG GATCGGCATCTGCACCTTCGTTTCCTCATTGCTGCGCAATCCCGAAGCCTATGGTGCGGCACTTGCCGGCTACACGGCGA TGATCATCGGCCTGCCTGCCTTCGGACAGCCGCATCTGGTCGTCGATCTCGCTGTCGCCCGTTGCGCGGAAATCGTGCTT GGCATCGTCTGCGCCGGCGTGACCAGCCGGCTGATCCTGCCGAAACTGGCCAGCGATGCCATCATATCGCGGCTGAAGCG CTGCATTCTCGACCTTGCCACCTATGCCGCGGGCGCCTTCTCGGGAGGTGATACAGCGACACTTTCCGCACTGCATCGCA AACTCGTCGCGGACACCCAGACACTTGGCGAAATGCGCGCCTATGCAAGGCTGGAAGCGCCGAGCTTCGCGCCGCGTGCC CACCCGGTGCGGCGCACCATCGGACAATTGCTCTCGGCCCTGTCGGCGGCACGCGCCCTGCATTCGCACGCCGCTCCGAA AAACGCAGCCCTCATCCCGGTGCGTTCGCAATTGCAGGCCCTTGTCGGCGATTTGGCAACAAAGCCCGGCGCACTGGACG ATACGGCACCCTGGGTGGAACAGCTCGACGCCATCTCGGCCAGGGCCCGGCAACTGCCCGATGCTTCAATCGACCAGGGT GACGACAGGGTCGGCACCATCACCCGCCTCACCATCGCCGCCGATTTCGCCGAGGCGCTCAAGCAGGTGCTGCGCGGGCT CGATGCCTTGCGCGCGCCGGTCACAGGTACCGGCCGCGCCGGCAGGCAGCCTGCGCTGGTGGTGCACCGCGACTACCCCG GCGCATCGCGCAATGCCGTGCGTGCCGCCCTTGCCACCCTGCTGGTCGCGGCCTTCTGGCTGACGACGAAATGGTCCGAG GCGGCGGGCACGGTCATTCTCGTTGCCGTCGTATCCAGCCTTTTCGCCGCTCGCCCCGATCCGGTGCAGGTGTCCTGGGG CTTCTTCAAGGGCACGCTGCTGGCTTTGCCCTTTGCCTTTCTCATCGGCCAGATCGCATTGCCTGCTTTGCCCGGCTTCG GCTGGTTCGTGCTGTTCGTTGTGCCGATCCTGGTGCCGACGGCGCTGGGCATGGCCAATCCGCGCTATGTCGGCATAGCC ACGGCCTTCGCCATCAACTTCCTCGCTTTCCTCAGCCCGCATCAGGCGATGACCTACGATCCTGGCCCGTTCTTCGCCGG CTCGGCGTCCGTTCTGGTAGGCATTCTGCTGGCGATCGGCGTCTTCATTGTCGTGCTGCCCGCCGATCCGTGGCTCGCGG CGAACCGGATCGTACGGGCCATGCGCGAGGATTTGGCACGGCTTTGCCTGCACGAGCGCGTGCCGAGGCGTTCGGCCTTC GAAAGCCTCGCCTATGACCGCATCAACCAGCTGATGCCGCTGGTGCAGAATTCCGGCAGGAAGGGTGATGCGGTGCTGGG CGGCGGCGTCGCCGCCGTCACGGTCGGCCTGGAGATCCTGCGGCTGCGCGGCGCGAGCCAAAACCATGCCATCCCGTCCG AAACCGCACTTTCGATCGCCAATTTCCTGAGAGGGCTGGCGCGCGAACTGCTGTTCCGCGCCCCCGGCGATCCGCAGACA GCCACCATTGCTGTCGCCCGGCAGTACGCGGCGAGCATCGCCCAGCGAAACGCCCCCGGCGACATGCTGCAGATCGCGGC ATCCCTGCGCATCATTGCCGCCGCGATGGAGGATTTTCCCGATTTTTTCGCGAGGGATAAAGCCTAG
Upstream 100 bases:
>100_bases TCCGCTTCATCCAGGAGCGTGCCGAATTCGCCGAGACGGAAGTGCTGGATATCTAGCCGCGGGCCAGTTTAGCTTGCGCT TCCGATATGGAGACCGGCAC
Downstream 100 bases:
>100_bases GCCGCCGCAATGGCCAGCGCGTGACCCCGCGCGTTCTCGCGCAGCGCGTCGAGATGGATCGACTTGACCAGGGCCGCGAG ATCGCCTTCCGCGGATTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: pHBA efflux pump protein B [H]
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MTWARLKAYFETSLAGLTQPTRSDWIFALRTVSAGLIALLAAYALKLDHPQWAMMTVFIVAQPVAGMVLAKGFYRLLGTL AGGLAAIGITTVFGTNPWVLVTVLAVWIGICTFVSSLLRNPEAYGAALAGYTAMIIGLPAFGQPHLVVDLAVARCAEIVL GIVCAGVTSRLILPKLASDAIISRLKRCILDLATYAAGAFSGGDTATLSALHRKLVADTQTLGEMRAYARLEAPSFAPRA HPVRRTIGQLLSALSAARALHSHAAPKNAALIPVRSQLQALVGDLATKPGALDDTAPWVEQLDAISARARQLPDASIDQG DDRVGTITRLTIAADFAEALKQVLRGLDALRAPVTGTGRAGRQPALVVHRDYPGASRNAVRAALATLLVAAFWLTTKWSE AAGTVILVAVVSSLFAARPDPVQVSWGFFKGTLLALPFAFLIGQIALPALPGFGWFVLFVVPILVPTALGMANPRYVGIA TAFAINFLAFLSPHQAMTYDPGPFFAGSASVLVGILLAIGVFIVVLPADPWLAANRIVRAMREDLARLCLHERVPRRSAF ESLAYDRINQLMPLVQNSGRKGDAVLGGGVAAVTVGLEILRLRGASQNHAIPSETALSIANFLRGLARELLFRAPGDPQT ATIAVARQYAASIAQRNAPGDMLQIAASLRIIAAAMEDFPDFFARDKA
Sequences:
>Translated_688_residues MTWARLKAYFETSLAGLTQPTRSDWIFALRTVSAGLIALLAAYALKLDHPQWAMMTVFIVAQPVAGMVLAKGFYRLLGTL AGGLAAIGITTVFGTNPWVLVTVLAVWIGICTFVSSLLRNPEAYGAALAGYTAMIIGLPAFGQPHLVVDLAVARCAEIVL GIVCAGVTSRLILPKLASDAIISRLKRCILDLATYAAGAFSGGDTATLSALHRKLVADTQTLGEMRAYARLEAPSFAPRA HPVRRTIGQLLSALSAARALHSHAAPKNAALIPVRSQLQALVGDLATKPGALDDTAPWVEQLDAISARARQLPDASIDQG DDRVGTITRLTIAADFAEALKQVLRGLDALRAPVTGTGRAGRQPALVVHRDYPGASRNAVRAALATLLVAAFWLTTKWSE AAGTVILVAVVSSLFAARPDPVQVSWGFFKGTLLALPFAFLIGQIALPALPGFGWFVLFVVPILVPTALGMANPRYVGIA TAFAINFLAFLSPHQAMTYDPGPFFAGSASVLVGILLAIGVFIVVLPADPWLAANRIVRAMREDLARLCLHERVPRRSAF ESLAYDRINQLMPLVQNSGRKGDAVLGGGVAAVTVGLEILRLRGASQNHAIPSETALSIANFLRGLARELLFRAPGDPQT ATIAVARQYAASIAQRNAPGDMLQIAASLRIIAAAMEDFPDFFARDKA >Mature_687_residues TWARLKAYFETSLAGLTQPTRSDWIFALRTVSAGLIALLAAYALKLDHPQWAMMTVFIVAQPVAGMVLAKGFYRLLGTLA GGLAAIGITTVFGTNPWVLVTVLAVWIGICTFVSSLLRNPEAYGAALAGYTAMIIGLPAFGQPHLVVDLAVARCAEIVLG IVCAGVTSRLILPKLASDAIISRLKRCILDLATYAAGAFSGGDTATLSALHRKLVADTQTLGEMRAYARLEAPSFAPRAH PVRRTIGQLLSALSAARALHSHAAPKNAALIPVRSQLQALVGDLATKPGALDDTAPWVEQLDAISARARQLPDASIDQGD DRVGTITRLTIAADFAEALKQVLRGLDALRAPVTGTGRAGRQPALVVHRDYPGASRNAVRAALATLLVAAFWLTTKWSEA AGTVILVAVVSSLFAARPDPVQVSWGFFKGTLLALPFAFLIGQIALPALPGFGWFVLFVVPILVPTALGMANPRYVGIAT AFAINFLAFLSPHQAMTYDPGPFFAGSASVLVGILLAIGVFIVVLPADPWLAANRIVRAMREDLARLCLHERVPRRSAFE SLAYDRINQLMPLVQNSGRKGDAVLGGGVAAVTVGLEILRLRGASQNHAIPSETALSIANFLRGLARELLFRAPGDPQTA TIAVARQYAASIAQRNAPGDMLQIAASLRIIAAAMEDFPDFFARDKA
Specific function: Efflux pump whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell [H]
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=521, Percent_Identity=27.447216890595, Blast_Score=149, Evalue=9e-37, Organism=Escherichia coli, GI1787933, Length=622, Percent_Identity=25.5627009646302, Blast_Score=139, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 72939; Mature: 72808
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWARLKAYFETSLAGLTQPTRSDWIFALRTVSAGLIALLAAYALKLDHPQWAMMTVFIV CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AQPVAGMVLAKGFYRLLGTLAGGLAAIGITTVFGTNPWVLVTVLAVWIGICTFVSSLLRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC PEAYGAALAGYTAMIIGLPAFGQPHLVVDLAVARCAEIVLGIVCAGVTSRLILPKLASDA CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IISRLKRCILDLATYAAGAFSGGDTATLSALHRKLVADTQTLGEMRAYARLEAPSFAPRA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HPVRRTIGQLLSALSAARALHSHAAPKNAALIPVRSQLQALVGDLATKPGALDDTAPWVE CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCHHHHH QLDAISARARQLPDASIDQGDDRVGTITRLTIAADFAEALKQVLRGLDALRAPVTGTGRA HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GRQPALVVHRDYPGASRNAVRAALATLLVAAFWLTTKWSEAAGTVILVAVVSSLFAARPD CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCC PVQVSWGFFKGTLLALPFAFLIGQIALPALPGFGWFVLFVVPILVPTALGMANPRYVGIA CCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH TAFAINFLAFLSPHQAMTYDPGPFFAGSASVLVGILLAIGVFIVVLPADPWLAANRIVRA HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH MREDLARLCLHERVPRRSAFESLAYDRINQLMPLVQNSGRKGDAVLGGGVAAVTVGLEIL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHH RLRGASQNHAIPSETALSIANFLRGLARELLFRAPGDPQTATIAVARQYAASIAQRNAPG HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCH DMLQIAASLRIIAAAMEDFPDFFARDKA HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TWARLKAYFETSLAGLTQPTRSDWIFALRTVSAGLIALLAAYALKLDHPQWAMMTVFIV CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AQPVAGMVLAKGFYRLLGTLAGGLAAIGITTVFGTNPWVLVTVLAVWIGICTFVSSLLRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC PEAYGAALAGYTAMIIGLPAFGQPHLVVDLAVARCAEIVLGIVCAGVTSRLILPKLASDA CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IISRLKRCILDLATYAAGAFSGGDTATLSALHRKLVADTQTLGEMRAYARLEAPSFAPRA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HPVRRTIGQLLSALSAARALHSHAAPKNAALIPVRSQLQALVGDLATKPGALDDTAPWVE CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCHHHHH QLDAISARARQLPDASIDQGDDRVGTITRLTIAADFAEALKQVLRGLDALRAPVTGTGRA HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GRQPALVVHRDYPGASRNAVRAALATLLVAAFWLTTKWSEAAGTVILVAVVSSLFAARPD CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHCCCC PVQVSWGFFKGTLLALPFAFLIGQIALPALPGFGWFVLFVVPILVPTALGMANPRYVGIA CCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH TAFAINFLAFLSPHQAMTYDPGPFFAGSASVLVGILLAIGVFIVVLPADPWLAANRIVRA HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH MREDLARLCLHERVPRRSAFESLAYDRINQLMPLVQNSGRKGDAVLGGGVAAVTVGLEIL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHH RLRGASQNHAIPSETALSIANFLRGLARELLFRAPGDPQTATIAVARQYAASIAQRNAPG HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCH DMLQIAASLRIIAAAMEDFPDFFARDKA HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA