Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471016
Identifier: 13471016
GI number: 13471016
Start: 703883
End: 704572
Strand: Direct
Name: 13471016
Synonym: mlr0876
Alternate gene names: NA
Gene position: 703883-704572 (Clockwise)
Preceding gene: 13471015
Following gene: 13471017
Centisome position: 10.0
GC content: 59.13
Gene sequence:
>690_bases GTGGAGACCGCCATGGCCGCCGAAACCCCGATCCCGAGACCCGTGCAGCGCCATATGCTGTTCGCGATGTCGGCGTGTTT CGGGGCGCTCGCGTTCCTCGTGGCGTTGCTGCTGCATGCCCCGCTCGCCTACTCGATCGGCGCCAATGCCTTTTTCGCCG CCTACGTCATTCTTGTCGTCAGCCAGATGCCCAAATTCACCGGAAAATATCTGAGCAAGAACGCGCGCGCCACCGATCAG CCGGTGCTGGTCATCTTCGCGGTGACGCTCGTCGTCGTTATCGTCGCCGTTGTCTCATTGTTCCTGCTTATCAATCAAAA GAACAGAGGCAATTCCGTCGAACTCGGTTTCGCGCTGCTGTCGATCCCGCTTGGCTGGTTCACCATCCATGCCATGGCCG CACTTCATTATGCGCATGTCTACTGGATGGACGGCGATGCGGTGGACGCTGAAACCAAGAAGAAAATCCCGGTCGGCGGA TTGCTGTTCCCAGGCGACAAGCGCCCGGAAGGTTGGGATTTCCTCTATTTCTCGGCAGTCATCGGCATGACGGCGCAAAC CGCCGACACCAACATCTCGACCACGCATATGCGCTGTGTCGTCCTCGTCCACTCGATCCTGTCGTTTTTCTTCAACACGG TCATCGTCGCCGCGGCCGTCAATCTCGCCGTCAGCCTGGGTGGTCCGTAA
Upstream 100 bases:
>100_bases GCACCGCAGGACCGTTCGCGGTTCCTTGGTGAACTCGACCGCATCTTGCGGCGCGCGCTGAAATCCGCCACACCCGGCTA GAAACCGAGCGCCATCCAGG
Downstream 100 bases:
>100_bases TAAATCCGTGATCGGGTGAAACATCGGTTTGGATCGCGACGTATCAGGAGGACAATGAACGCGCAGGCCACGCCGTGAGG CCGGGAGACGAAACAAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues METAMAAETPIPRPVQRHMLFAMSACFGALAFLVALLLHAPLAYSIGANAFFAAYVILVVSQMPKFTGKYLSKNARATDQ PVLVIFAVTLVVVIVAVVSLFLLINQKNRGNSVELGFALLSIPLGWFTIHAMAALHYAHVYWMDGDAVDAETKKKIPVGG LLFPGDKRPEGWDFLYFSAVIGMTAQTADTNISTTHMRCVVLVHSILSFFFNTVIVAAAVNLAVSLGGP
Sequences:
>Translated_229_residues METAMAAETPIPRPVQRHMLFAMSACFGALAFLVALLLHAPLAYSIGANAFFAAYVILVVSQMPKFTGKYLSKNARATDQ PVLVIFAVTLVVVIVAVVSLFLLINQKNRGNSVELGFALLSIPLGWFTIHAMAALHYAHVYWMDGDAVDAETKKKIPVGG LLFPGDKRPEGWDFLYFSAVIGMTAQTADTNISTTHMRCVVLVHSILSFFFNTVIVAAAVNLAVSLGGP >Mature_229_residues METAMAAETPIPRPVQRHMLFAMSACFGALAFLVALLLHAPLAYSIGANAFFAAYVILVVSQMPKFTGKYLSKNARATDQ PVLVIFAVTLVVVIVAVVSLFLLINQKNRGNSVELGFALLSIPLGWFTIHAMAALHYAHVYWMDGDAVDAETKKKIPVGG LLFPGDKRPEGWDFLYFSAVIGMTAQTADTNISTTHMRCVVLVHSILSFFFNTVIVAAAVNLAVSLGGP
Specific function: Unknown
COG id: COG4291
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24717; Mature: 24717
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METAMAAETPIPRPVQRHMLFAMSACFGALAFLVALLLHAPLAYSIGANAFFAAYVILVV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHH SQMPKFTGKYLSKNARATDQPVLVIFAVTLVVVIVAVVSLFLLINQKNRGNSVELGFALL HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SIPLGWFTIHAMAALHYAHVYWMDGDAVDAETKKKIPVGGLLFPGDKRPEGWDFLYFSAV HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHCCCCCCCEECCCCCCCCCCHHHHHHHH IGMTAQTADTNISTTHMRCVVLVHSILSFFFNTVIVAAAVNLAVSLGGP HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure METAMAAETPIPRPVQRHMLFAMSACFGALAFLVALLLHAPLAYSIGANAFFAAYVILVV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHH SQMPKFTGKYLSKNARATDQPVLVIFAVTLVVVIVAVVSLFLLINQKNRGNSVELGFALL HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SIPLGWFTIHAMAALHYAHVYWMDGDAVDAETKKKIPVGGLLFPGDKRPEGWDFLYFSAV HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHCCCCCCCEECCCCCCCCCCHHHHHHHH IGMTAQTADTNISTTHMRCVVLVHSILSFFFNTVIVAAAVNLAVSLGGP HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA