Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is yaiI [C]
Identifier: 13471015
GI number: 13471015
Start: 703363
End: 703863
Strand: Direct
Name: yaiI [C]
Synonym: mlr0875
Alternate gene names: 13471015
Gene position: 703363-703863 (Clockwise)
Preceding gene: 13471014
Following gene: 13471016
Centisome position: 10.0
GC content: 64.47
Gene sequence:
>501_bases ATGTTTCCGGCCCCTGTCCGTTTCGGAGAGATTATGCCCGCCCCCACCATTTACGTCGATGCCGACGCCTGCCCGGTCAA GGCCGAGGTCGAAAAGGTCGCCGAGCGCCTCGGCGTCGTCGTCACCTACGTCTCCAATGGCGGCTTGCGGCCATCGCGCG ATCCGATGATCCGCAATGTCGTGGTCTCCAAGGGCGCCGACGCCGCCGACGACTGGATTGTCGAGAACGCCAAATCCAAC GATGTCGTGGTGACTGCCGATATTCCGCTTGCCGCTCGAGCGGTGGCGCTCGGCGCGCATGTGCTTGGGCCCACCGGGAG GCCGTTCACGCCCGAAACGATCGGCATGGCGGTGGCCATGCGCGACCTCAAGCAGCATTTACGCGAGACCGGTGAAAGCA AGGGCTACAATGCCTCCTTCGCACCGCAGGACCGTTCGCGGTTCCTTGGTGAACTCGACCGCATCTTGCGGCGCGCGCTG AAATCCGCCACACCCGGCTAG
Upstream 100 bases:
>100_bases CCTCAACCCCGGCCTGATGGACTATATCGCCACCTGGACGGCGAAGAAGTCCGGCGCCTTGCCGGCCTGAACCCTGTAAG ATTTCAGGCAGGGGCCGGAC
Downstream 100 bases:
>100_bases AAACCGAGCGCCATCCAGGGTGGAGACCGCCATGGCCGCCGAAACCCCGATCCCGAGACCCGTGCAGCGCCATATGCTGT TCGCGATGTCGGCGTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MFPAPVRFGEIMPAPTIYVDADACPVKAEVEKVAERLGVVVTYVSNGGLRPSRDPMIRNVVVSKGADAADDWIVENAKSN DVVVTADIPLAARAVALGAHVLGPTGRPFTPETIGMAVAMRDLKQHLRETGESKGYNASFAPQDRSRFLGELDRILRRAL KSATPG
Sequences:
>Translated_166_residues MFPAPVRFGEIMPAPTIYVDADACPVKAEVEKVAERLGVVVTYVSNGGLRPSRDPMIRNVVVSKGADAADDWIVENAKSN DVVVTADIPLAARAVALGAHVLGPTGRPFTPETIGMAVAMRDLKQHLRETGESKGYNASFAPQDRSRFLGELDRILRRAL KSATPG >Mature_166_residues MFPAPVRFGEIMPAPTIYVDADACPVKAEVEKVAERLGVVVTYVSNGGLRPSRDPMIRNVVVSKGADAADDWIVENAKSN DVVVTADIPLAARAVALGAHVLGPTGRPFTPETIGMAVAMRDLKQHLRETGESKGYNASFAPQDRSRFLGELDRILRRAL KSATPG
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=143, Percent_Identity=43.3566433566434, Blast_Score=104, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 17796; Mature: 17796
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPAPVRFGEIMPAPTIYVDADACPVKAEVEKVAERLGVVVTYVSNGGLRPSRDPMIRNV CCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHH VVSKGADAADDWIVENAKSNDVVVTADIPLAARAVALGAHVLGPTGRPFTPETIGMAVAM HHHCCCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RDLKQHLRETGESKGYNASFAPQDRSRFLGELDRILRRALKSATPG HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFPAPVRFGEIMPAPTIYVDADACPVKAEVEKVAERLGVVVTYVSNGGLRPSRDPMIRNV CCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHH VVSKGADAADDWIVENAKSNDVVVTADIPLAARAVALGAHVLGPTGRPFTPETIGMAVAM HHHCCCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RDLKQHLRETGESKGYNASFAPQDRSRFLGELDRILRRALKSATPG HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]