Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is sam [H]
Identifier: 13471009
GI number: 13471009
Start: 693663
End: 694544
Strand: Direct
Name: sam [H]
Synonym: mlr0868
Alternate gene names: 13471009
Gene position: 693663-694544 (Clockwise)
Preceding gene: 13471007
Following gene: 13471013
Centisome position: 9.86
GC content: 64.63
Gene sequence:
>882_bases ATGGCACCCACCCCCTCGATCCCCAAGGCCGCGTTCTGGATGGCGCTGTCGATTAGCTCTTTCCTGGCGATGTCGGTCGC CGGCCGCGCCACCACAGCCGAACTCAACGTCTTCCAGGTGCTGGAACTGCGCTCGGTGATCGGCTTCTTCATCCTCTTGC CGCTGGTGCTGACGAGCGGCGGCTTCGCGGCGATGCGCACGCAGCGTCCCCTCGCCCATATCGCCCGCAACGTCGTCCAC TATAGTGGGCAGGCGGCATGGCTCTACGCCTTGACGCTGATCCCGCTGGCGGTGCTCATCTCGATCGAATTCACCACGCC GATCTGGACGGCGATCCTGGCGGTGACTTTTCTTGGCGAAAGGCTGAGCCGGCCGAAACTGGCGGCTGTCGGGCTCGGGC TGATCGGCGTGGTGGTCATCGTCCGTCCAGGCGTCGACGCGGTCGATCCCGGACATCTGGTCGTGCTGGGCGCCGCGGTC TGTTTCGGCATCTCGCTGGTGCTGGTCAAATCGCTGACGCGCACCGACAGCGTCGTGCGCATCATCTTCTGGATGCTGAT CATCCAGTCGGCGCTCGGCCTCGTCCCCGCGCTCTACGTGTGGCGCACGCCATCGCTCGAACTGTGGCCCTGGATCCTGC TGATCGCATTCACCGGCATGTCGTCGCATTTCTGCATGGCCCGCGCGCTCACCTATGCCGACGCCACCGTCATCTCGCCA ATGGATTTCCTGCGGGTGCCCTTGTCGGCGCTGGTCGGCTGGCTGCTTTATCACGAGCAGATCGACGCTTTCACCGCTGG CGGCGCGCTGCTGATCCTGATGGGCAATCTCCTCAATCTGCAGCGCAAACCGGTGCAGCCGGCTGAAGTGGCGGCATCGT AG
Upstream 100 bases:
>100_bases GCAACATGGCCGTCTTGCAACATCACGCCATTGCAACTGGCCCAGAAGAATGGAGCGACTAGCGATTGCGGCAAAAGCCC CGGCCTGCGAGATAGCTGCC
Downstream 100 bases:
>100_bases CGCCCGTTAGGTGTATTGAGATTCAGGTCAACCGAGTCGAGAACGGTAGGTTCCGAGAACCGGAACGGAGCGTACATTTT GGTACGTGAGTACAGTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MAPTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSGGFAAMRTQRPLAHIARNVVH YSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGERLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAV CFGISLVLVKSLTRTDSVVRIIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISP MDFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS
Sequences:
>Translated_293_residues MAPTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSGGFAAMRTQRPLAHIARNVVH YSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGERLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAV CFGISLVLVKSLTRTDSVVRIIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISP MDFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS >Mature_292_residues APTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSGGFAAMRTQRPLAHIARNVVHY SGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGERLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAVC FGISLVLVKSLTRTDSVVRIIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISPM DFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31598; Mature: 31467
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GFAAMRTQRPLAHIARNVVHYSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGE CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAVCFGISLVLVKSLTRTDSVVR HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCH MDFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure APTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC GFAAMRTQRPLAHIARNVVHYSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGE CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAVCFGISLVLVKSLTRTDSVVR HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCH MDFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]