Click here to switch to the map view.

The map label for this gene is ycjP [H]

Identifier: 13470996

GI number: 13470996

Start: 678896

End: 679744

Strand: Reverse

Name: ycjP [H]

Synonym: mll0851

Alternate gene names: 13470996

Gene position: 679744-678896 (Counterclockwise)

Preceding gene: 13470997

Following gene: 13470995

Centisome position: 9.66

GC content: 61.6

Gene sequence:

>849_bases
ATGATCGCGGGACGCTCAAACTCACAACGGTTCTTCGGCGGTGTCGGCCTCTATGCGGCAATCGCGGCCTATGTGGTCTT
CGCCTTGTTCCCGATCTACTGGACGCTGAAGATCTCGGTCACGCCGGAACGGCTGCTCTATTCGGAAGGCGTCACCTTCT
GGCCTTCGCGGATGACGTTGCAGAATTTTGTCACCGTGCTCGAGGCCACCGATTTCCCGCGCTATTTCCTCAACAGCGTC
ATCGTCTCGGTGTCGACGGCGGCCTTGGTGACCGTCACCGCCACGCTCGCCGGCTACGCCATGTCGCGCTTCACCTTTCG
CGGCAAGGCGGCGCTGGCCTTGATGCTGCTTTTGACCCAGACGTTTCCGCTGGTGATGGTCATTCCGCCGATCTACCGGG
TGATGGGGCAGATCGGCCTGATCAACAGCCTGACAGGGCTGATCATCATCTACACCGCCTTCAACACTGCCTTCGCCACC
TTCCTGATGCAGTCCTTCTTCGACGGCATCCCGAAGGATCTGGAGGAGGCGGCGATGATCGACGGCTGCACCCGTGCGCA
GGCGATGCGCAAGGTGATCGTGCCGCTCACCCTGCCCGGCATGGGCGCGACGCTCGGCTTTGTCTTCACCGCCGCCTGGA
GCGAGCTTCTGTTCGCGCTGATGCTGATTTCCAGCGACGACCAGAAGACTTTTGCCGTCGGCCTGCTCACCTTCATCGGC
AAGTTCGCCGTCGACTGGGGGCAGATGATGGCGGCATCCATCCTGGCGCTGATCCCGGTCTGCATCTTCTTCGCTTTCCT
GCAACGCTATCTCGTCACCGGCCTGACCGCCGGCGCCGTCAAAGGATAG

Upstream 100 bases:

>100_bases
AGGGCTATGCCTCGGCTGTGGCCGTGCTGCTCCTCGTCCTGCTCATTGCCTATGCGATCGCGCTGATCGCCATCCGCCGC
TCCCTGGTGAGGCACGTCTG

Downstream 100 bases:

>100_bases
ATCGATGGCTTCTGTTACACTCGATAAGGTCCGCAAGGACTATGGCGCCGTCCGCGTCCTGCACGCGGTCGATCTTGAAA
TCGCCGATGGCGAGTTCGTC

Product: permease protein of suger ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIAGRSNSQRFFGGVGLYAAIAAYVVFALFPIYWTLKISVTPERLLYSEGVTFWPSRMTLQNFVTVLEATDFPRYFLNSV
IVSVSTAALVTVTATLAGYAMSRFTFRGKAALALMLLLTQTFPLVMVIPPIYRVMGQIGLINSLTGLIIIYTAFNTAFAT
FLMQSFFDGIPKDLEEAAMIDGCTRAQAMRKVIVPLTLPGMGATLGFVFTAAWSELLFALMLISSDDQKTFAVGLLTFIG
KFAVDWGQMMAASILALIPVCIFFAFLQRYLVTGLTAGAVKG

Sequences:

>Translated_282_residues
MIAGRSNSQRFFGGVGLYAAIAAYVVFALFPIYWTLKISVTPERLLYSEGVTFWPSRMTLQNFVTVLEATDFPRYFLNSV
IVSVSTAALVTVTATLAGYAMSRFTFRGKAALALMLLLTQTFPLVMVIPPIYRVMGQIGLINSLTGLIIIYTAFNTAFAT
FLMQSFFDGIPKDLEEAAMIDGCTRAQAMRKVIVPLTLPGMGATLGFVFTAAWSELLFALMLISSDDQKTFAVGLLTFIG
KFAVDWGQMMAASILALIPVCIFFAFLQRYLVTGLTAGAVKG
>Mature_282_residues
MIAGRSNSQRFFGGVGLYAAIAAYVVFALFPIYWTLKISVTPERLLYSEGVTFWPSRMTLQNFVTVLEATDFPRYFLNSV
IVSVSTAALVTVTATLAGYAMSRFTFRGKAALALMLLLTQTFPLVMVIPPIYRVMGQIGLINSLTGLIIIYTAFNTAFAT
FLMQSFFDGIPKDLEEAAMIDGCTRAQAMRKVIVPLTLPGMGATLGFVFTAAWSELLFALMLISSDDQKTFAVGLLTFIG
KFAVDWGQMMAASILALIPVCIFFAFLQRYLVTGLTAGAVKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=279, Percent_Identity=31.8996415770609, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1790464, Length=214, Percent_Identity=33.6448598130841, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789860, Length=255, Percent_Identity=27.0588235294118, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30763; Mature: 30763

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]