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The map label for this gene is ycjO [C]

Identifier: 13470997

GI number: 13470997

Start: 679744

End: 680667

Strand: Reverse

Name: ycjO [C]

Synonym: mll0853

Alternate gene names: 13470997

Gene position: 680667-679744 (Counterclockwise)

Preceding gene: 13470998

Following gene: 13470996

Centisome position: 9.67

GC content: 64.18

Gene sequence:

>924_bases
ATGACCTATGCCGTGTCCGAAATCCGATCCGCCGGCAAGCCGCGACGAAAGCGGCTGTCGCACGCCGCCATCGAGCCCTG
GCTCTATCTCAGTCCGTCGATCATACTGCTGGTCGTGGTGCTGCTGGTGCCGCTGGTCATCGGCATCAGCTACTCCTTCC
GCAAATTCTCGGCCTTCAAGTCGGAATTTGTCGGGCTCGGGCAGTATCGCGCGATGCTGTCGGATCCGGTGCTGGGGCAG
GCGCTGGTCAACACGCTGTGGTGGACGGTCGCCAGCCTGTTCTTCCAGTTCTTCCTCGGCCTTGGCCTGGCGCTGCTGCT
CGACAAGCCGTTCCGGGGCCGCAAGCTGGTGCAGGCGCTGGTGTTCCTGCCCTGGGCGGTGCCGTCCTTCCTGTCCGGCC
TGACCTGGGCCTGGCTGTTCAACCCGATCATCGGCCCGTTGCCGCATTGGCTTTTCGCACTCGGGCTGAAGGCCGAGCCG
ACCAACATTCTCTCTGATCCCGCCACCGCCATGTGGGGGCCGATCGTCGCCAATGTCTGGTTCGGCATTCCGTTCTTCGC
CATCACGCTGCTGGCGGCGCTGAAGTCCATTCCGTCCGAACTGCATGAGGCGGCGGCGATCGACGGCGCTTCGCCCTGGC
AGCGCTTCACCAAGGTGACGCTGCCGTTCCTGGCGCCGACCATTGCCATCACCGTGATGCTGCGCACCATCTGGATCGCC
ACCTTCGCCGACCTCATCTTCGTCATGACCGAGGGAGGACCGGCCGGCTCGACCAACACGGTGCCGGTCTACATCTATGT
CAGCGCCTTCAAATCGCTGGACAAGGGCTATGCCTCGGCTGTGGCCGTGCTGCTCCTCGTCCTGCTCATTGCCTATGCGA
TCGCGCTGATCGCCATCCGCCGCTCCCTGGTGAGGCACGTCTGA

Upstream 100 bases:

>100_bases
GCGCTGCCCCTCATCTGGCTGCCGCCATCTTCTCCCCGTGAACGGGGAGAAGGACGCTGTCGCCGACGCCGGCATTCACT
CATTCACCGCAGAGCTGCCA

Downstream 100 bases:

>100_bases
TGATCGCGGGACGCTCAAACTCACAACGGTTCTTCGGCGGTGTCGGCCTCTATGCGGCAATCGCGGCCTATGTGGTCTTC
GCCTTGTTCCCGATCTACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTYAVSEIRSAGKPRRKRLSHAAIEPWLYLSPSIILLVVVLLVPLVIGISYSFRKFSAFKSEFVGLGQYRAMLSDPVLGQ
ALVNTLWWTVASLFFQFFLGLGLALLLDKPFRGRKLVQALVFLPWAVPSFLSGLTWAWLFNPIIGPLPHWLFALGLKAEP
TNILSDPATAMWGPIVANVWFGIPFFAITLLAALKSIPSELHEAAAIDGASPWQRFTKVTLPFLAPTIAITVMLRTIWIA
TFADLIFVMTEGGPAGSTNTVPVYIYVSAFKSLDKGYASAVAVLLLVLLIAYAIALIAIRRSLVRHV

Sequences:

>Translated_307_residues
MTYAVSEIRSAGKPRRKRLSHAAIEPWLYLSPSIILLVVVLLVPLVIGISYSFRKFSAFKSEFVGLGQYRAMLSDPVLGQ
ALVNTLWWTVASLFFQFFLGLGLALLLDKPFRGRKLVQALVFLPWAVPSFLSGLTWAWLFNPIIGPLPHWLFALGLKAEP
TNILSDPATAMWGPIVANVWFGIPFFAITLLAALKSIPSELHEAAAIDGASPWQRFTKVTLPFLAPTIAITVMLRTIWIA
TFADLIFVMTEGGPAGSTNTVPVYIYVSAFKSLDKGYASAVAVLLLVLLIAYAIALIAIRRSLVRHV
>Mature_306_residues
TYAVSEIRSAGKPRRKRLSHAAIEPWLYLSPSIILLVVVLLVPLVIGISYSFRKFSAFKSEFVGLGQYRAMLSDPVLGQA
LVNTLWWTVASLFFQFFLGLGLALLLDKPFRGRKLVQALVFLPWAVPSFLSGLTWAWLFNPIIGPLPHWLFALGLKAEPT
NILSDPATAMWGPIVANVWFGIPFFAITLLAALKSIPSELHEAAAIDGASPWQRFTKVTLPFLAPTIAITVMLRTIWIAT
FADLIFVMTEGGPAGSTNTVPVYIYVSAFKSLDKGYASAVAVLLLVLLIAYAIALIAIRRSLVRHV

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=263, Percent_Identity=33.4600760456274, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1789861, Length=285, Percent_Identity=31.5789473684211, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790465, Length=261, Percent_Identity=34.4827586206897, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788764, Length=218, Percent_Identity=33.0275229357798, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33755; Mature: 33623

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYAVSEIRSAGKPRRKRLSHAAIEPWLYLSPSIILLVVVLLVPLVIGISYSFRKFSAFK
CCCCHHHHHHCCCHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SEFVGLGQYRAMLSDPVLGQALVNTLWWTVASLFFQFFLGLGLALLLDKPFRGRKLVQAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VFLPWAVPSFLSGLTWAWLFNPIIGPLPHWLFALGLKAEPTNILSDPATAMWGPIVANVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHH
FGIPFFAITLLAALKSIPSELHEAAAIDGASPWQRFTKVTLPFLAPTIAITVMLRTIWIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFADLIFVMTEGGPAGSTNTVPVYIYVSAFKSLDKGYASAVAVLLLVLLIAYAIALIAIR
HHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLVRHV
HHHHHCC
>Mature Secondary Structure 
TYAVSEIRSAGKPRRKRLSHAAIEPWLYLSPSIILLVVVLLVPLVIGISYSFRKFSAFK
CCCHHHHHHCCCHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH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HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA