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The map label for this gene is yedQ [H]

Identifier: 13470925

GI number: 13470925

Start: 592298

End: 593584

Strand: Direct

Name: yedQ [H]

Synonym: mlr0754

Alternate gene names: 13470925

Gene position: 592298-593584 (Clockwise)

Preceding gene: 13470924

Following gene: 13470932

Centisome position: 8.42

GC content: 63.64

Gene sequence:

>1287_bases
ATGCGTTTTGCGCGTAGCAAAACGCCTATTCCTGGGCATCTTCGCCGCGATCGTAACTTTATCGACACTTCCTTGCTGCA
TGAATGCGGCGACGGCAAGCCGCACAGCTGGAGCCGCCGCCGGCAGGGAAAGAGGGGCATGTCGCTCGACTACACTTCAC
TTCTGCTGGCCGTCGGTTTCTCCGCCGCTTGCCTGAGCCTGACATTGTTCGGCATGTGGCTGACCGCCCGCACGGAACGG
TTTCTGCTGACATGGGCGATCAGCCTGGTGTTCGTGGTCGGCGATATCTTTGTCTACGACGCCTATATCGACATGCCCGG
ACGCTTGCTCGGCATCGCCACCCTTGCCCTGTTGCTGCTCGGCTTCTCCACCATGCTGGGTGCGGCCTTCCAGTTCAGAA
CCGGCGGCTCGCCGCTGCCGCTCGCACTGTTGGGCTGTGTTTCACTGGCGGTGACGCTGCCACCCATGGCTCTGGGCTAC
GATGGCCTCGGCTTCATGTTCGAGAACCTGTTCGCTGCCTTGCTCCTGTTCGCGACGGCATTCGAATACTGGCGAGGCCG
CGACGAGGCCCCTGCCCTGACGATCGGCATCACCACGCTCTATTCGGCCACCGCCGTTTCCTTCATGCTGTGCGCGGCGG
TCCTGGCATGGGACGGCAGGCTGGTTCTCGGCCATGCACCAAGCAACTGGGCCGAGGAACTGAGCCTCATTGTCGTCATC
GCCAGCATGACGGGTATTGGTGCCCTGTCGCTTGCGCTCAACCAGGGGCGTCTGGCGAGGCATCATCGCCGCAATGCGCT
CACCGATCCCTTGACCGGCCTGCTCAACCGGCGCGCGCTTTTCGACATGCATGGCCACGTCCCGGTCGGTGCCTTTACCG
CTGTGGTCGTCTTCGACCTCGACAATTTCAAAGCCATCAACGACGAGTTCGGCCACGCGGCCGGTGACGAGGTGCTGAAG
GTGTTTGCGAGGGAACTCGCCGGCAATCTTCGCCAGACCGACATCGCCGCGCGCATGGGCGGCGAGGAATTCGCACTGGT
GCTGAAGCGCACGCTGCCGGAAACGGTCGAGGACGCGGCAGAGCGCATCCGGACCGCCTTCGCGACACGCCTGATAGAGA
CCGAAACCGGCTCGCTGAGGTGCACGGTCAGCGCCGGGTTTGCATTTGGCAGCAAAGAGGGCCTCAGCTTCGACAAGGTG
CTCAGCGCCGCCGACAAGGCGCTCTACGACGCCAAGCGCGGCGGCCGCAACCGCGTCACCGCCTCTCCATTCCGGCGCGC
GAGCTGA

Upstream 100 bases:

>100_bases
GGTGCGCGCGCCGTTCGGGGCGATGGCGCTGATGAAGCGCATAGCCGGCTGACAAGCATCCGTTGTTGTTGTTCGGCTGC
ATGCTGTAAGCGCATCATCC

Downstream 100 bases:

>100_bases
GCGAATGTATCGGTGCCGAGCCTGTGATTGTCGGCTAGGCGAAAGCGGCTCTATGCCGCCATCACGATTTCATTGAAGGT
ATCAAGGTCGACATAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRFARSKTPIPGHLRRDRNFIDTSLLHECGDGKPHSWSRRRQGKRGMSLDYTSLLLAVGFSAACLSLTLFGMWLTARTER
FLLTWAISLVFVVGDIFVYDAYIDMPGRLLGIATLALLLLGFSTMLGAAFQFRTGGSPLPLALLGCVSLAVTLPPMALGY
DGLGFMFENLFAALLLFATAFEYWRGRDEAPALTIGITTLYSATAVSFMLCAAVLAWDGRLVLGHAPSNWAEELSLIVVI
ASMTGIGALSLALNQGRLARHHRRNALTDPLTGLLNRRALFDMHGHVPVGAFTAVVVFDLDNFKAINDEFGHAAGDEVLK
VFARELAGNLRQTDIAARMGGEEFALVLKRTLPETVEDAAERIRTAFATRLIETETGSLRCTVSAGFAFGSKEGLSFDKV
LSAADKALYDAKRGGRNRVTASPFRRAS

Sequences:

>Translated_428_residues
MRFARSKTPIPGHLRRDRNFIDTSLLHECGDGKPHSWSRRRQGKRGMSLDYTSLLLAVGFSAACLSLTLFGMWLTARTER
FLLTWAISLVFVVGDIFVYDAYIDMPGRLLGIATLALLLLGFSTMLGAAFQFRTGGSPLPLALLGCVSLAVTLPPMALGY
DGLGFMFENLFAALLLFATAFEYWRGRDEAPALTIGITTLYSATAVSFMLCAAVLAWDGRLVLGHAPSNWAEELSLIVVI
ASMTGIGALSLALNQGRLARHHRRNALTDPLTGLLNRRALFDMHGHVPVGAFTAVVVFDLDNFKAINDEFGHAAGDEVLK
VFARELAGNLRQTDIAARMGGEEFALVLKRTLPETVEDAAERIRTAFATRLIETETGSLRCTVSAGFAFGSKEGLSFDKV
LSAADKALYDAKRGGRNRVTASPFRRAS
>Mature_428_residues
MRFARSKTPIPGHLRRDRNFIDTSLLHECGDGKPHSWSRRRQGKRGMSLDYTSLLLAVGFSAACLSLTLFGMWLTARTER
FLLTWAISLVFVVGDIFVYDAYIDMPGRLLGIATLALLLLGFSTMLGAAFQFRTGGSPLPLALLGCVSLAVTLPPMALGY
DGLGFMFENLFAALLLFATAFEYWRGRDEAPALTIGITTLYSATAVSFMLCAAVLAWDGRLVLGHAPSNWAEELSLIVVI
ASMTGIGALSLALNQGRLARHHRRNALTDPLTGLLNRRALFDMHGHVPVGAFTAVVVFDLDNFKAINDEFGHAAGDEVLK
VFARELAGNLRQTDIAARMGGEEFALVLKRTLPETVEDAAERIRTAFATRLIETETGSLRCTVSAGFAFGSKEGLSFDKV
LSAADKALYDAKRGGRNRVTASPFRRAS

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87081881, Length=174, Percent_Identity=40.2298850574713, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI87082007, Length=171, Percent_Identity=40.9356725146199, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786584, Length=207, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1787262, Length=166, Percent_Identity=33.7349397590361, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1787802, Length=130, Percent_Identity=38.4615384615385, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI145693134, Length=160, Percent_Identity=35.625, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788381, Length=178, Percent_Identity=35.3932584269663, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787541, Length=158, Percent_Identity=37.3417721518987, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787816, Length=155, Percent_Identity=35.4838709677419, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081974, Length=181, Percent_Identity=27.6243093922652, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788085, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788956, Length=157, Percent_Identity=36.9426751592357, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081977, Length=167, Percent_Identity=30.5389221556886, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787056, Length=160, Percent_Identity=30, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 46544; Mature: 46544

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFARSKTPIPGHLRRDRNFIDTSLLHECGDGKPHSWSRRRQGKRGMSLDYTSLLLAVGF
CCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHH
SAACLSLTLFGMWLTARTERFLLTWAISLVFVVGDIFVYDAYIDMPGRLLGIATLALLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHH
GFSTMLGAAFQFRTGGSPLPLALLGCVSLAVTLPPMALGYDGLGFMFENLFAALLLFATA
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHH
FEYWRGRDEAPALTIGITTLYSATAVSFMLCAAVLAWDGRLVLGHAPSNWAEELSLIVVI
HHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
ASMTGIGALSLALNQGRLARHHRRNALTDPLTGLLNRRALFDMHGHVPVGAFTAVVVFDL
HHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEC
DNFKAINDEFGHAAGDEVLKVFARELAGNLRQTDIAARMGGEEFALVLKRTLPETVEDAA
CCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHH
ERIRTAFATRLIETETGSLRCTVSAGFAFGSKEGLSFDKVLSAADKALYDAKRGGRNRVT
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
ASPFRRAS
CCCCCCCC
>Mature Secondary Structure
MRFARSKTPIPGHLRRDRNFIDTSLLHECGDGKPHSWSRRRQGKRGMSLDYTSLLLAVGF
CCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHH
SAACLSLTLFGMWLTARTERFLLTWAISLVFVVGDIFVYDAYIDMPGRLLGIATLALLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHH
GFSTMLGAAFQFRTGGSPLPLALLGCVSLAVTLPPMALGYDGLGFMFENLFAALLLFATA
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHH
FEYWRGRDEAPALTIGITTLYSATAVSFMLCAAVLAWDGRLVLGHAPSNWAEELSLIVVI
HHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
ASMTGIGALSLALNQGRLARHHRRNALTDPLTGLLNRRALFDMHGHVPVGAFTAVVVFDL
HHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEC
DNFKAINDEFGHAAGDEVLKVFARELAGNLRQTDIAARMGGEEFALVLKRTLPETVEDAA
CCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHH
ERIRTAFATRLIETETGSLRCTVSAGFAFGSKEGLSFDKVLSAADKALYDAKRGGRNRVT
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
ASPFRRAS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA