Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470924
Identifier: 13470924
GI number: 13470924
Start: 591443
End: 592249
Strand: Direct
Name: 13470924
Synonym: mlr0752
Alternate gene names: NA
Gene position: 591443-592249 (Clockwise)
Preceding gene: 13470923
Following gene: 13470925
Centisome position: 8.41
GC content: 61.59
Gene sequence:
>807_bases ATGAGCAAATCGGGAACAATCCGCTCCGGCATGGGCGGCTGGACCTTTGAGCCCTGGGATACGTCCTTCTATCCGGATAA GTTGTCGAAGGCCAAGCAGCTGCAATATGCCAGCCGGCAGGTGCCGAGCATCGAGGTCAACGGTACCTACTATTCCAGCT TCAAGGAGCCGACCTTCGTCAAATGGGCAAGCGAGGCGCCGGACGGGTTTGTCTATTCGCTTAAGGGCAACCGCTTCGTC ACCAATCGCCGCGTGCTGGGCGAGGCCGGTGAATCGATGATGCGCTTCCTCGGTTCCGGCGTTGCCGCGCTCGGCGACAA GCTCGGCCCGATCCTGTGGCAGTTCGCGCCGACGAAAAAGTTCGATCCGGACGATTTCGAAGCTTTTTTGAAACTGCTGC CGGAGAAACAGGATGGTGTCGCACTGCGTCACGCGCTCGAAGTCCGCAACGACAGTTTCTTCGTGCCGGAATTCGCGGCG CTTGCCCGTAAATACAAGGCGGCGATCGTCTATGCCGACCATGCCAAATATCCTGACATCGCCGACGTCACCGGTGACTT CGTCTACGCACGGCTGCAGACCGGCTCGGACGACAACCCCGATTGCTACACGCCCAAGGGGCTCGACGAGTGGGCGGCAC GGGCAAAAATATGGGCGGAAGGCAAGCAGCCGGCCGATTTGCGGCGCGCCGATCCCGCCACCGACGCGCCCGTGCAGCCG CGCGATGTGTTCGTCTACTTCATCACCGAGGGCAAGGTGCGCGCGCCGTTCGGGGCGATGGCGCTGATGAAGCGCATAGC CGGCTGA
Upstream 100 bases:
>100_bases TCGACATGGCAAAACCGGTCGACGAGACCACGACGGCCTGATTTTCTGAACGCGGCCAGACTTCTGAATTTGGCCAGACG CTGCACTCGGGAGGACAACA
Downstream 100 bases:
>100_bases CAAGCATCCGTTGTTGTTGTTCGGCTGCATGCTGTAAGCGCATCATCCATGCGTTTTGCGCGTAGCAAAACGCCTATTCC TGGGCATCTTCGCCGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSKSGTIRSGMGGWTFEPWDTSFYPDKLSKAKQLQYASRQVPSIEVNGTYYSSFKEPTFVKWASEAPDGFVYSLKGNRFV TNRRVLGEAGESMMRFLGSGVAALGDKLGPILWQFAPTKKFDPDDFEAFLKLLPEKQDGVALRHALEVRNDSFFVPEFAA LARKYKAAIVYADHAKYPDIADVTGDFVYARLQTGSDDNPDCYTPKGLDEWAARAKIWAEGKQPADLRRADPATDAPVQP RDVFVYFITEGKVRAPFGAMALMKRIAG
Sequences:
>Translated_268_residues MSKSGTIRSGMGGWTFEPWDTSFYPDKLSKAKQLQYASRQVPSIEVNGTYYSSFKEPTFVKWASEAPDGFVYSLKGNRFV TNRRVLGEAGESMMRFLGSGVAALGDKLGPILWQFAPTKKFDPDDFEAFLKLLPEKQDGVALRHALEVRNDSFFVPEFAA LARKYKAAIVYADHAKYPDIADVTGDFVYARLQTGSDDNPDCYTPKGLDEWAARAKIWAEGKQPADLRRADPATDAPVQP RDVFVYFITEGKVRAPFGAMALMKRIAG >Mature_267_residues SKSGTIRSGMGGWTFEPWDTSFYPDKLSKAKQLQYASRQVPSIEVNGTYYSSFKEPTFVKWASEAPDGFVYSLKGNRFVT NRRVLGEAGESMMRFLGSGVAALGDKLGPILWQFAPTKKFDPDDFEAFLKLLPEKQDGVALRHALEVRNDSFFVPEFAAL ARKYKAAIVYADHAKYPDIADVTGDFVYARLQTGSDDNPDCYTPKGLDEWAARAKIWAEGKQPADLRRADPATDAPVQPR DVFVYFITEGKVRAPFGAMALMKRIAG
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29865; Mature: 29734
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSGTIRSGMGGWTFEPWDTSFYPDKLSKAKQLQYASRQVPSIEVNGTYYSSFKEPTFV CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCEE KWASEAPDGFVYSLKGNRFVTNRRVLGEAGESMMRFLGSGVAALGDKLGPILWQFAPTKK EECCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCC FDPDDFEAFLKLLPEKQDGVALRHALEVRNDSFFVPEFAALARKYKAAIVYADHAKYPDI CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHEEEEEECCCCCCCH ADVTGDFVYARLQTGSDDNPDCYTPKGLDEWAARAKIWAEGKQPADLRRADPATDAPVQP HHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC RDVFVYFITEGKVRAPFGAMALMKRIAG CEEEEEEEECCCEECCHHHHHHHHHHCC >Mature Secondary Structure SKSGTIRSGMGGWTFEPWDTSFYPDKLSKAKQLQYASRQVPSIEVNGTYYSSFKEPTFV CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCEE KWASEAPDGFVYSLKGNRFVTNRRVLGEAGESMMRFLGSGVAALGDKLGPILWQFAPTKK EECCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCC FDPDDFEAFLKLLPEKQDGVALRHALEVRNDSFFVPEFAALARKYKAAIVYADHAKYPDI CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHEEEEEECCCCCCCH ADVTGDFVYARLQTGSDDNPDCYTPKGLDEWAARAKIWAEGKQPADLRRADPATDAPVQP HHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC RDVFVYFITEGKVRAPFGAMALMKRIAG CEEEEEEEECCCEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA