Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470900
Identifier: 13470900
GI number: 13470900
Start: 569379
End: 569921
Strand: Direct
Name: 13470900
Synonym: mlr0720
Alternate gene names: NA
Gene position: 569379-569921 (Clockwise)
Preceding gene: 13470884
Following gene: 13470908
Centisome position: 8.09
GC content: 58.38
Gene sequence:
>543_bases ATGACATTCCGATGGCGAATATTCGCAATCGGTGAAACCGGGATACACCGCCAAGCGTATGTTATCGTGCGTCTTCGGAC ATCATTTTTGAGGGATCATTCCGAGGGACAACGGAGACAGGCCATGCGCCGCGCTTTTTTCGCATTCACAGTCATTCCAT TCCTTTTCATATCCTCGGCCTTTGCCGGCGATGCCGAAATCAAGGCAGGCCAGGCGGTCATCGACGGTCAGTTGAAGGCG CTGCTGGCCGATGACGGCGCCAAGGCCTACAGCTTCGCCGCCCCGAATGTGAAGCAGGTGTTCCCGACCGTCGACGCCTT CATGAACATGGTGACCAATGGCTACCCGCCGGTGCGCAAGCCACAGTCCTATGCCTTCGGCAAGGTCGAGCAAACCGGTC CGGGCTCGATTATCCAGCAGGTGCTGATCGTCGGACCCGACGGCAAGGATTACGAGGCGGTCTATACGCTGCAGCAGCAG CCCGACGGCACGTTGCAGATCACCGGCTGCAGCCTGCGCGCATCCAACTCGCTGAGTACTTAA
Upstream 100 bases:
>100_bases GCGGCCCTTCTGGCAGACTGGAGGCGGCCTTTCAAGCACTGGAATCCGCACTTAGCCGGCGTGGCCCCTGGCCACGGCCT CGCGCAGCTCCGCAACAGGC
Downstream 100 bases:
>100_bases GGTTCTACAGGACCGGGATATCGCCCCTCGCCCAGCCCTCTGTGATCTCGGCCCCACGCGCCTCGAAGGTTTGGGTCTCG ATCGCGGCGCGAATGTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTFRWRIFAIGETGIHRQAYVIVRLRTSFLRDHSEGQRRQAMRRAFFAFTVIPFLFISSAFAGDAEIKAGQAVIDGQLKA LLADDGAKAYSFAAPNVKQVFPTVDAFMNMVTNGYPPVRKPQSYAFGKVEQTGPGSIIQQVLIVGPDGKDYEAVYTLQQQ PDGTLQITGCSLRASNSLST
Sequences:
>Translated_180_residues MTFRWRIFAIGETGIHRQAYVIVRLRTSFLRDHSEGQRRQAMRRAFFAFTVIPFLFISSAFAGDAEIKAGQAVIDGQLKA LLADDGAKAYSFAAPNVKQVFPTVDAFMNMVTNGYPPVRKPQSYAFGKVEQTGPGSIIQQVLIVGPDGKDYEAVYTLQQQ PDGTLQITGCSLRASNSLST >Mature_179_residues TFRWRIFAIGETGIHRQAYVIVRLRTSFLRDHSEGQRRQAMRRAFFAFTVIPFLFISSAFAGDAEIKAGQAVIDGQLKAL LADDGAKAYSFAAPNVKQVFPTVDAFMNMVTNGYPPVRKPQSYAFGKVEQTGPGSIIQQVLIVGPDGKDYEAVYTLQQQP DGTLQITGCSLRASNSLST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19815; Mature: 19684
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRWRIFAIGETGIHRQAYVIVRLRTSFLRDHSEGQRRQAMRRAFFAFTVIPFLFISSA CCEEEEEEEECCCCCCCEEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FAGDAEIKAGQAVIDGQLKALLADDGAKAYSFAAPNVKQVFPTVDAFMNMVTNGYPPVRK CCCCCCCCCCCEEECCHHEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC PQSYAFGKVEQTGPGSIIQQVLIVGPDGKDYEAVYTLQQQPDGTLQITGCSLRASNSLST CCCCCCCCCCCCCCHHHHHEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCC >Mature Secondary Structure TFRWRIFAIGETGIHRQAYVIVRLRTSFLRDHSEGQRRQAMRRAFFAFTVIPFLFISSA CEEEEEEEECCCCCCCEEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FAGDAEIKAGQAVIDGQLKALLADDGAKAYSFAAPNVKQVFPTVDAFMNMVTNGYPPVRK CCCCCCCCCCCEEECCHHEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC PQSYAFGKVEQTGPGSIIQQVLIVGPDGKDYEAVYTLQQQPDGTLQITGCSLRASNSLST CCCCCCCCCCCCCCHHHHHEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA