Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470884
Identifier: 13470884
GI number: 13470884
Start: 552198
End: 552944
Strand: Direct
Name: 13470884
Synonym: mlr0699
Alternate gene names: NA
Gene position: 552198-552944 (Clockwise)
Preceding gene: 13470883
Following gene: 13470900
Centisome position: 7.85
GC content: 58.37
Gene sequence:
>747_bases GTGCCTCGACCGGTCAACCGGAAAAAGAGCATCCGCAAGCCAGACTTCTCAAGCATTTCCACCGAGGCACCCTGCCCGCT TCGTTCAACGGCGCAACGCCCCTGGCAAAGCGACGGCATCACCTCTTTTCAGCTCAGCTGGCAGGCCAGAGAAACATTAC AAATCAGCAACTTGGGATTTAGCGAGGAACCTTACACGCTACCGCTCGTTGTCTCGCCACAAGGGACGTCAATCACCCTT TCGAAGGAGAAGACCATGAACAAGATCGTATCGGGTATACTGGCGGCCACTTTGTCCGTTTCGTTTGTAGCGGCCGCGAT TCCGGCCAATGCCGCTCAGATGTTCGTGCCGCAGGCACCGGAGGCCTCATCCAATACTCTGAACGTTGAAGCCCGCAACG GTGATCGGAACTTCCAATGGCGTCATAACCGCTATGGCAACCGCGACTTCGGCGTCCGTCGCAACTTTGCCCGAAACAAT GACGGCGGCGCCTACTGGAACGGTCATCGCGGCTATCGTGAGTACCATCGCGGCTATCGTCGCCATGGCGACAACTGGTT CCCGCTGGCGGCCTTCGCGACTGGCGCCCTGATCACCGGCGCGATCGTCAACAGCGAGAACAACCGCTTCCACGAAGGCA ATGCGCATGTGCAGTGGTGCTACGACCGCTATCGCAGCTATCGTGCTTCGGACAACACATTCCAGCCGAACTACGGACCG CGTCAGGAGTGCCGTTCGCCTTACTGA
Upstream 100 bases:
>100_bases CATGACCTACTGATTAAAAGTCAGTTGCTCTACCGGCTGAGCTACGCGCTCCCGCGGGCGCGAAAGGGCGGCCCTCGAAA TTGCGCGGAACATAGGGAGA
Downstream 100 bases:
>100_bases CCCCAGGTATCGGCAGCTGAGTACAAGGCCCGCGTCGGAAACGGCGCGGGTCTCTCTTATGCGCTTAGCGTCCTGCGCAC AGCATCGCGCCAGCCTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPRPVNRKKSIRKPDFSSISTEAPCPLRSTAQRPWQSDGITSFQLSWQARETLQISNLGFSEEPYTLPLVVSPQGTSITL SKEKTMNKIVSGILAATLSVSFVAAAIPANAAQMFVPQAPEASSNTLNVEARNGDRNFQWRHNRYGNRDFGVRRNFARNN DGGAYWNGHRGYREYHRGYRRHGDNWFPLAAFATGALITGAIVNSENNRFHEGNAHVQWCYDRYRSYRASDNTFQPNYGP RQECRSPY
Sequences:
>Translated_248_residues MPRPVNRKKSIRKPDFSSISTEAPCPLRSTAQRPWQSDGITSFQLSWQARETLQISNLGFSEEPYTLPLVVSPQGTSITL SKEKTMNKIVSGILAATLSVSFVAAAIPANAAQMFVPQAPEASSNTLNVEARNGDRNFQWRHNRYGNRDFGVRRNFARNN DGGAYWNGHRGYREYHRGYRRHGDNWFPLAAFATGALITGAIVNSENNRFHEGNAHVQWCYDRYRSYRASDNTFQPNYGP RQECRSPY >Mature_247_residues PRPVNRKKSIRKPDFSSISTEAPCPLRSTAQRPWQSDGITSFQLSWQARETLQISNLGFSEEPYTLPLVVSPQGTSITLS KEKTMNKIVSGILAATLSVSFVAAAIPANAAQMFVPQAPEASSNTLNVEARNGDRNFQWRHNRYGNRDFGVRRNFARNND GGAYWNGHRGYREYHRGYRRHGDNWFPLAAFATGALITGAIVNSENNRFHEGNAHVQWCYDRYRSYRASDNTFQPNYGPR QECRSPY
Specific function: Has immunoglobulin-binding and hemagglutination properties, and can bind to mannose. Essential for virulence. May be involved in LPS biosynthesis or polysaccharide transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BA14k family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012413 [H]
Pfam domain/function: PF07886 BA14K [H]
EC number: NA
Molecular weight: Translated: 28139; Mature: 28008
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPVNRKKSIRKPDFSSISTEAPCPLRSTAQRPWQSDGITSFQLSWQARETLQISNLGF CCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCC SEEPYTLPLVVSPQGTSITLSKEKTMNKIVSGILAATLSVSFVAAAIPANAAQMFVPQAP CCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCC EASSNTLNVEARNGDRNFQWRHNRYGNRDFGVRRNFARNNDGGAYWNGHRGYREYHRGYR CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHH RHGDNWFPLAAFATGALITGAIVNSENNRFHEGNAHVQWCYDRYRSYRASDNTFQPNYGP HCCCCCEEHHHHHHHHHHEEEEEECCCCEEECCCCEEEHHHHHHHHHCCCCCCCCCCCCC RQECRSPY HHHHCCCC >Mature Secondary Structure PRPVNRKKSIRKPDFSSISTEAPCPLRSTAQRPWQSDGITSFQLSWQARETLQISNLGF CCCCCCHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCC SEEPYTLPLVVSPQGTSITLSKEKTMNKIVSGILAATLSVSFVAAAIPANAAQMFVPQAP CCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCC EASSNTLNVEARNGDRNFQWRHNRYGNRDFGVRRNFARNNDGGAYWNGHRGYREYHRGYR CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHH RHGDNWFPLAAFATGALITGAIVNSENNRFHEGNAHVQWCYDRYRSYRASDNTFQPNYGP HCCCCCEEHHHHHHHHHHEEEEEECCCCEEECCCCEEEHHHHHHHHHCCCCCCCCCCCCC RQECRSPY HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA