Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470880
Identifier: 13470880
GI number: 13470880
Start: 546615
End: 547244
Strand: Direct
Name: 13470880
Synonym: mlr0694
Alternate gene names: NA
Gene position: 546615-547244 (Clockwise)
Preceding gene: 13470875
Following gene: 13470881
Centisome position: 7.77
GC content: 62.06
Gene sequence:
>630_bases GTGCGACGAAATGATCGAAGGACATTTGATGTCCGATCAAGCCGCCCTATTTCCTTTTGGCCGCCGAATTTGCACGCACG GCAGCCCAGGGAGGCTTCGGTGGAACCCAAGGATGTGCAGGAACCCAGGGACATTGCAGCCCGCCGCCTGAGCATGGTCA TCGAACAATATGTCGAGGCCAGAAAACGGCGTTATGACTTCGTGTCGACGGATCAGGCCGCCAGGGTGATCCGCAAGATC CTGAAACCCGCGGACCCAGCCCTCTCCGACCGCAAGCTCGACGATATGGTCACTGCCGTCGCCGTCAAGAACGGCCTGGC GGTCGCCTTCGATCGTGGCGTCAGAGCACCGACCGATGGCACCGAGGCCGACCTGAGCAGAAAGGAACCGACCATGCGAG CACCAAGGGAGACTCCCGATGTTGCCGGCGCGGTGGACGCCATTCTGGCCACCCAGGCCGCCCCGCTTTCCCAAAACACC CCGCTTTCCCAATTGACTCCGCTTTCAATGAGGGCGGTGATCTCGCTGTTGCGCGAACGGACCGGCACCAAGCGATCGGA CGCGGATCTGGAAGGCCTGATCGCCAAGAAGGCGGCGGTCCTGGACGTGCACTTGTCGCGGAACGGCTGA
Upstream 100 bases:
>100_bases GTGGCGCGACATGAGCGATCTTCATGGCCCGGCCTTCCCTCAATGCGCTGGTCATGGAACGAAATGCTTCAGCCGCAGGA TCGTTCCGGCCCATTGGCGG
Downstream 100 bases:
>100_bases ACGGTCGATCGCGACGCGCTGCGGCGGCCTGCGAGCGAGGCTAATGTCCTCGCTCGCGACATTCGGTTGCAGCCGAAAGC CACGGATCGGCCCCACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MRRNDRRTFDVRSSRPISFWPPNLHARQPREASVEPKDVQEPRDIAARRLSMVIEQYVEARKRRYDFVSTDQAARVIRKI LKPADPALSDRKLDDMVTAVAVKNGLAVAFDRGVRAPTDGTEADLSRKEPTMRAPRETPDVAGAVDAILATQAAPLSQNT PLSQLTPLSMRAVISLLRERTGTKRSDADLEGLIAKKAAVLDVHLSRNG
Sequences:
>Translated_209_residues MRRNDRRTFDVRSSRPISFWPPNLHARQPREASVEPKDVQEPRDIAARRLSMVIEQYVEARKRRYDFVSTDQAARVIRKI LKPADPALSDRKLDDMVTAVAVKNGLAVAFDRGVRAPTDGTEADLSRKEPTMRAPRETPDVAGAVDAILATQAAPLSQNT PLSQLTPLSMRAVISLLRERTGTKRSDADLEGLIAKKAAVLDVHLSRNG >Mature_209_residues MRRNDRRTFDVRSSRPISFWPPNLHARQPREASVEPKDVQEPRDIAARRLSMVIEQYVEARKRRYDFVSTDQAARVIRKI LKPADPALSDRKLDDMVTAVAVKNGLAVAFDRGVRAPTDGTEADLSRKEPTMRAPRETPDVAGAVDAILATQAAPLSQNT PLSQLTPLSMRAVISLLRERTGTKRSDADLEGLIAKKAAVLDVHLSRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23214; Mature: 23214
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRNDRRTFDVRSSRPISFWPPNLHARQPREASVEPKDVQEPRDIAARRLSMVIEQYVEA CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RKRRYDFVSTDQAARVIRKILKPADPALSDRKLDDMVTAVAVKNGLAVAFDRGVRAPTDG HHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC TEADLSRKEPTMRAPRETPDVAGAVDAILATQAAPLSQNTPLSQLTPLSMRAVISLLRER CHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHH TGTKRSDADLEGLIAKKAAVLDVHLSRNG CCCCCCCCHHHHHHHHHHHEEEEEECCCC >Mature Secondary Structure MRRNDRRTFDVRSSRPISFWPPNLHARQPREASVEPKDVQEPRDIAARRLSMVIEQYVEA CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RKRRYDFVSTDQAARVIRKILKPADPALSDRKLDDMVTAVAVKNGLAVAFDRGVRAPTDG HHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC TEADLSRKEPTMRAPRETPDVAGAVDAILATQAAPLSQNTPLSQLTPLSMRAVISLLRER CHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHH TGTKRSDADLEGLIAKKAAVLDVHLSRNG CCCCCCCCHHHHHHHHHHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA