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The map label for this gene is smf [H]

Identifier: 13470875

GI number: 13470875

Start: 539202

End: 540335

Strand: Direct

Name: smf [H]

Synonym: mlr0689

Alternate gene names: 13470875

Gene position: 539202-540335 (Clockwise)

Preceding gene: 13470874

Following gene: 13470880

Centisome position: 7.66

GC content: 67.81

Gene sequence:

>1134_bases
ATGAGCGAGCCGGCCGCCGGGCCGCGCCTCAGCGACCGGCAGCGGCTGAACTGGCTGCGGCTGATCCGCACCCAGAATGT
CGGCCCCGCTTCCTTTCGCGACCTGATCAACCGTTTCGGGTCAGCCGAAGTGGCGCTGGAAATCCTGCCGGAACTGATGG
TTTCGGGCGGTGCCAGCAGGATCGCCCGCATTCCGTCAATCGCTGAGGCCGAGGCCGAACTCGAGGCAGCCCGCCGGGCT
GGCGCGCGTTTTGTCGGTATCGGCGAGCCCGACTATCCCCCGCTGCTGAGAAGCATGGACAATCCCCCACCTCTTTTGGC
GGTCAAAGGCAATGCCGCTGTCTTCCGGCTGCCTGGGGTCGCCATCGTCGGCGCCCGCAATGCATCGCTGGCCGGCATCA
AGATGGCGCGTATGCTGGCGGCTACCCTTGGCGGCGATGGCTACGGCATAGTCTCCGGCCTGGCGCGCGGTATCGACACG
GCGGCGCATCAAGGCAGCCTGCAAACCGGCACGATCGGTGTGCTCGCCGGAGGCCTCGACCTGCCCTACCCGCCCGAAAA
TGCCGGCCTATGCGCGGAAATCGCCGAGCGCGGCGCCGTCATCTCCGAAATGCCGTTCGGCTGGCAGCCGCGCGCTCAGG
ATTTTCCACGCCGCAACCGTCTTGTCGCGGGTGCTGCCCTCGGGCTGGTGGTGGTCGAGGCCGCCCAGCGTTCGGGCTCG
CTGATCAGCGCCAGGCTTGCCGGCGAAATGGGCCGGCTGGTTTTTGCCGTGCCGGGCTCTCCGCTCGATCCACGCGCCGC
CGGCACCAACGGTTTGCTCAAGGACGGCGCCACGCTGGTCACCGAGGCATCGGACATTTCCAGGGCGATCGCGCCGCTGA
CCGGCATGCGAGCGCCCGCTGTGCCACCGTTCGAGGATCCGCCCGACTTTTCGGCCACACCGCCACCCGGCGAGAGCGAC
CGCGCCAAGGTCATCGAAGCGCTAGGCCCGACACCGGTGCCAGTCGACGAGATCATCCGCCACACCGGCCTTCACCCGGC
CCAGGTCTTCATGGTTCTGTTGGAACTCGACCTCGCCGGCCGGCTCGAACGCCATGCCGGCGGCAATGTTTCGCTGATTT
TCGGGGAAGGCTGA

Upstream 100 bases:

>100_bases
GCATCATCGTCTTCATCAAGCACAGGGCGAACATTTCGCGGCTGCTTGCCGGCACCGAGGGCAAGATCGGAGCCAAGGGG
TGAGCGAGCGCGCCGCCGCG

Downstream 100 bases:

>100_bases
CCGCAGCCGTCAATGGCGGTTGGGTTCCTTCTCCCCGGTCTCGGCGTAATCTGGCGTGTTGGCTCCAAACAGATCATTTT
CGACAGCCTTGCGCCAGACT

Product: DNA processing chain A

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSEPAAGPRLSDRQRLNWLRLIRTQNVGPASFRDLINRFGSAEVALEILPELMVSGGASRIARIPSIAEAEAELEAARRA
GARFVGIGEPDYPPLLRSMDNPPPLLAVKGNAAVFRLPGVAIVGARNASLAGIKMARMLAATLGGDGYGIVSGLARGIDT
AAHQGSLQTGTIGVLAGGLDLPYPPENAGLCAEIAERGAVISEMPFGWQPRAQDFPRRNRLVAGAALGLVVVEAAQRSGS
LISARLAGEMGRLVFAVPGSPLDPRAAGTNGLLKDGATLVTEASDISRAIAPLTGMRAPAVPPFEDPPDFSATPPPGESD
RAKVIEALGPTPVPVDEIIRHTGLHPAQVFMVLLELDLAGRLERHAGGNVSLIFGEG

Sequences:

>Translated_377_residues
MSEPAAGPRLSDRQRLNWLRLIRTQNVGPASFRDLINRFGSAEVALEILPELMVSGGASRIARIPSIAEAEAELEAARRA
GARFVGIGEPDYPPLLRSMDNPPPLLAVKGNAAVFRLPGVAIVGARNASLAGIKMARMLAATLGGDGYGIVSGLARGIDT
AAHQGSLQTGTIGVLAGGLDLPYPPENAGLCAEIAERGAVISEMPFGWQPRAQDFPRRNRLVAGAALGLVVVEAAQRSGS
LISARLAGEMGRLVFAVPGSPLDPRAAGTNGLLKDGATLVTEASDISRAIAPLTGMRAPAVPPFEDPPDFSATPPPGESD
RAKVIEALGPTPVPVDEIIRHTGLHPAQVFMVLLELDLAGRLERHAGGNVSLIFGEG
>Mature_376_residues
SEPAAGPRLSDRQRLNWLRLIRTQNVGPASFRDLINRFGSAEVALEILPELMVSGGASRIARIPSIAEAEAELEAARRAG
ARFVGIGEPDYPPLLRSMDNPPPLLAVKGNAAVFRLPGVAIVGARNASLAGIKMARMLAATLGGDGYGIVSGLARGIDTA
AHQGSLQTGTIGVLAGGLDLPYPPENAGLCAEIAERGAVISEMPFGWQPRAQDFPRRNRLVAGAALGLVVVEAAQRSGSL
ISARLAGEMGRLVFAVPGSPLDPRAAGTNGLLKDGATLVTEASDISRAIAPLTGMRAPAVPPFEDPPDFSATPPPGESDR
AKVIEALGPTPVPVDEIIRHTGLHPAQVFMVLLELDLAGRLERHAGGNVSLIFGEG

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=288, Percent_Identity=38.8888888888889, Blast_Score=157, Evalue=9e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39191; Mature: 39059

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPAAGPRLSDRQRLNWLRLIRTQNVGPASFRDLINRFGSAEVALEILPELMVSGGASR
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH
IARIPSIAEAEAELEAARRAGARFVGIGEPDYPPLLRSMDNPPPLLAVKGNAAVFRLPGV
HHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCEEEECCCEEEEEECCE
AIVGARNASLAGIKMARMLAATLGGDGYGIVSGLARGIDTAAHQGSLQTGTIGVLAGGLD
EEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
LPYPPENAGLCAEIAERGAVISEMPFGWQPRAQDFPRRNRLVAGAALGLVVVEAAQRSGS
CCCCCCCCCHHHHHHHCCCEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCC
LISARLAGEMGRLVFAVPGSPLDPRAAGTNGLLKDGATLVTEASDISRAIAPLTGMRAPA
EEHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHCCCEEEECHHHHHHHHHHHHCCCCCC
VPPFEDPPDFSATPPPGESDRAKVIEALGPTPVPVDEIIRHTGLHPAQVFMVLLELDLAG
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
RLERHAGGNVSLIFGEG
HHHHCCCCCEEEEECCC
>Mature Secondary Structure 
SEPAAGPRLSDRQRLNWLRLIRTQNVGPASFRDLINRFGSAEVALEILPELMVSGGASR
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH
IARIPSIAEAEAELEAARRAGARFVGIGEPDYPPLLRSMDNPPPLLAVKGNAAVFRLPGV
HHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCEEEECCCEEEEEECCE
AIVGARNASLAGIKMARMLAATLGGDGYGIVSGLARGIDTAAHQGSLQTGTIGVLAGGLD
EEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
LPYPPENAGLCAEIAERGAVISEMPFGWQPRAQDFPRRNRLVAGAALGLVVVEAAQRSGS
CCCCCCCCCHHHHHHHCCCEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCC
LISARLAGEMGRLVFAVPGSPLDPRAAGTNGLLKDGATLVTEASDISRAIAPLTGMRAPA
EEHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHCCCEEEECHHHHHHHHHHHHCCCCCC
VPPFEDPPDFSATPPPGESDRAKVIEALGPTPVPVDEIIRHTGLHPAQVFMVLLELDLAG
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
RLERHAGGNVSLIFGEG
HHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]