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The map label for this gene is ycfF [C]

Identifier: 13470853

GI number: 13470853

Start: 518908

End: 519339

Strand: Direct

Name: ycfF [C]

Synonym: mlr0662

Alternate gene names: 13470853

Gene position: 518908-519339 (Clockwise)

Preceding gene: 13470852

Following gene: 13470857

Centisome position: 7.37

GC content: 60.42

Gene sequence:

>432_bases
ATGGCTGAAACCGCCTATGAGACCGACAACATCTTCGCAAAGATCCTGCGTGGAGAAATTCCCTCGCACCGCGTCTACGA
AGACGACGCCGTCGTCGCCTTCATGGATGTGATGCCGCAAGGACCCGGCCATACGCTGGTTGTGCCAAAAGCCCCGTCGC
GCAATCTGCTCGACGCCAACCCGTCGACCTTCGGCCCACTTTTCAACGTCGTCCAGAAAGTGGCGCAGGCGGTCAAGAAG
GCGCTCAATGCCGACGGCGTCACCATCCTGCAGTTCAACGAGCCAGCCTCGGGGCAGACCGTCTATCACCTGCACGTCCA
TGTCATCCCGCGCTTCGACGGCATTCCGTTGAAGCCGCACACGGGCACGATGGAAAAACCCGAAGTGCTGGTTGAGCACG
CCGAGAAAATACGCGCGGCGCTGGGGAGCTAA

Upstream 100 bases:

>100_bases
CTGGCATGGCCGATCTCGCCTGATCGCCCGTCCCATCGTCTTGCCGCTCCGGAAGAGCTTCGCTACACGGGACGCGAGGC
AAAAATCCGGAGCGTTCGCT

Downstream 100 bases:

>100_bases
CCTCACAACCGGCCAGCGGTGCGATCGCCCGGCTGAGCGCCATCTCGCATCAGCCGCTGGCGGATCGCTTGCGCGCCCTG
TTCAGGGCTGAGGACCGACC

Product: cell-cycle regulation Hit-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAETAYETDNIFAKILRGEIPSHRVYEDDAVVAFMDVMPQGPGHTLVVPKAPSRNLLDANPSTFGPLFNVVQKVAQAVKK
ALNADGVTILQFNEPASGQTVYHLHVHVIPRFDGIPLKPHTGTMEKPEVLVEHAEKIRAALGS

Sequences:

>Translated_143_residues
MAETAYETDNIFAKILRGEIPSHRVYEDDAVVAFMDVMPQGPGHTLVVPKAPSRNLLDANPSTFGPLFNVVQKVAQAVKK
ALNADGVTILQFNEPASGQTVYHLHVHVIPRFDGIPLKPHTGTMEKPEVLVEHAEKIRAALGS
>Mature_142_residues
AETAYETDNIFAKILRGEIPSHRVYEDDAVVAFMDVMPQGPGHTLVVPKAPSRNLLDANPSTFGPLFNVVQKVAQAVKKA
LNADGVTILQFNEPASGQTVYHLHVHVIPRFDGIPLKPHTGTMEKPEVLVEHAEKIRAALGS

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=104, Percent_Identity=39.4230769230769, Blast_Score=70, Evalue=7e-13,
Organism=Escherichia coli, GI1787346, Length=114, Percent_Identity=35.9649122807018, Blast_Score=69, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17506713, Length=105, Percent_Identity=39.0476190476191, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320078, Length=103, Percent_Identity=35.9223300970874, Blast_Score=68, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28574010, Length=109, Percent_Identity=43.1192660550459, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24581222, Length=109, Percent_Identity=43.1192660550459, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15587; Mature: 15456

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETAYETDNIFAKILRGEIPSHRVYEDDAVVAFMDVMPQGPGHTLVVPKAPSRNLLDAN
CCCCCCCHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCC
PSTFGPLFNVVQKVAQAVKKALNADGVTILQFNEPASGQTVYHLHVHVIPRFDGIPLKPH
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCC
TGTMEKPEVLVEHAEKIRAALGS
CCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AETAYETDNIFAKILRGEIPSHRVYEDDAVVAFMDVMPQGPGHTLVVPKAPSRNLLDAN
CCCCCCHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCC
PSTFGPLFNVVQKVAQAVKKALNADGVTILQFNEPASGQTVYHLHVHVIPRFDGIPLKPH
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCC
TGTMEKPEVLVEHAEKIRAALGS
CCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978084; 9403685 [H]