Click here to switch to the map view.

The map label for this gene is nocM [H]

Identifier: 13470760

GI number: 13470760

Start: 405593

End: 406414

Strand: Direct

Name: nocM [H]

Synonym: mlr0551

Alternate gene names: 13470760

Gene position: 405593-406414 (Clockwise)

Preceding gene: 13470759

Following gene: 13470761

Centisome position: 5.76

GC content: 60.34

Gene sequence:

>822_bases
ATGAGCGCCACCGCCGCCATGGTCGAACGGCCGCCACCGCGGACCCGCGGCTGGCCGCGACCGCGCATCGTCGGCTACGC
GCTGGTCTGCCTATGGATCGCCTTTGGCCTTGGCATCGTCGGCTATCTTGTCTTTGCCTGGAACCCGGTCTTCTTCGCCA
AATATGCGCCGGCCTATCTGAGCGGACTGGGCGTTACCTTGTCGCTGGTCGCCATTTCAATGGTGCTTGGCGCCGTCCTG
TCGATGCCCGTTGCTTACGGGCGCATGTCCAGAAACCGGATCCTGTCCGGCCTTGCTTACTGTTACGTCTATTTCTTTCG
AGGCACGCCGCTGCTGGTTCAGACGTTCCTGATCTATTACGGGCTGGGGTCGTTCAGGCCGGAACTCCAGATGATCGGGC
TTTGGGATTTCTTCAAGGACGCCTTCAACTGCGGCGTCTTCGCCTTTGCGCTCAACACCGCCGCCTACCAGGCCGAAATC
CTGCGCGGCGCCATCGAAAGCGTGCACAGGGGCCAATGGGAAGGCGCTGCATCCCTCGGCCTGCACAAATTGCAGACGCT
GCGCAAGATCATCCTGCCGCAAGCTCTGATCGTCGCCTTGCGGCCCTACGGCAATGAGCTGATCCTGATGGTCAAGGCGT
CCGCCATCGTCGCCATCATCACCGTCTACGACCTGATGGGCAATGCGAAACTCGCCTTTGCCAATTCCTTCGATATCCAG
GCCTATATCTGGGTCGCCCTGGTGTACCTGGTGATGGTCGAGTTGTTGCGCCATGCGATCGAATGGATCGAGCGCCGGAT
CACCATTCACCTGAAGCGTTGA

Upstream 100 bases:

>100_bases
TTTACAGCATTGCGGCTCTGGTCTTTCTCGGTCTGGCCGTCGTGTCATCCTTCGCCACCGGTGCCATTTTGCGCTCGCTT
GGCAAACGGGAGGCACAACG

Downstream 100 bases:

>100_bases
CCCGTTTTCGGCTGTGCCAGTCGATCGCACCACGCGCGTCTTGACGAATTAAGCGCAGGGCCTAGAGCTTTCCCAGCAAT
TTCGTTTCCGTCTGAAGGGC

Product: ABC transporter permease

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSATAAMVERPPPRTRGWPRPRIVGYALVCLWIAFGLGIVGYLVFAWNPVFFAKYAPAYLSGLGVTLSLVAISMVLGAVL
SMPVAYGRMSRNRILSGLAYCYVYFFRGTPLLVQTFLIYYGLGSFRPELQMIGLWDFFKDAFNCGVFAFALNTAAYQAEI
LRGAIESVHRGQWEGAASLGLHKLQTLRKIILPQALIVALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFDIQ
AYIWVALVYLVMVELLRHAIEWIERRITIHLKR

Sequences:

>Translated_273_residues
MSATAAMVERPPPRTRGWPRPRIVGYALVCLWIAFGLGIVGYLVFAWNPVFFAKYAPAYLSGLGVTLSLVAISMVLGAVL
SMPVAYGRMSRNRILSGLAYCYVYFFRGTPLLVQTFLIYYGLGSFRPELQMIGLWDFFKDAFNCGVFAFALNTAAYQAEI
LRGAIESVHRGQWEGAASLGLHKLQTLRKIILPQALIVALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFDIQ
AYIWVALVYLVMVELLRHAIEWIERRITIHLKR
>Mature_272_residues
SATAAMVERPPPRTRGWPRPRIVGYALVCLWIAFGLGIVGYLVFAWNPVFFAKYAPAYLSGLGVTLSLVAISMVLGAVLS
MPVAYGRMSRNRILSGLAYCYVYFFRGTPLLVQTFLIYYGLGSFRPELQMIGLWDFFKDAFNCGVFAFALNTAAYQAEIL
RGAIESVHRGQWEGAASLGLHKLQTLRKIILPQALIVALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFDIQA
YIWVALVYLVMVELLRHAIEWIERRITIHLKR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1788226, Length=213, Percent_Identity=38.4976525821596, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=37.6146788990826, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787030, Length=226, Percent_Identity=30.0884955752212, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787087, Length=229, Percent_Identity=30.5676855895196, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1788646, Length=222, Percent_Identity=29.7297297297297, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786874, Length=239, Percent_Identity=30.9623430962343, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=28.2296650717703, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786873, Length=223, Percent_Identity=25.1121076233184, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30550; Mature: 30419

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATAAMVERPPPRTRGWPRPRIVGYALVCLWIAFGLGIVGYLVFAWNPVFFAKYAPAYL
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SGLGVTLSLVAISMVLGAVLSMPVAYGRMSRNRILSGLAYCYVYFFRGTPLLVQTFLIYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GLGSFRPELQMIGLWDFFKDAFNCGVFAFALNTAAYQAEILRGAIESVHRGQWEGAASLG
CCCCCCCCHHEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LHKLQTLRKIILPQALIVALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFDIQ
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCHH
AYIWVALVYLVMVELLRHAIEWIERRITIHLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
SATAAMVERPPPRTRGWPRPRIVGYALVCLWIAFGLGIVGYLVFAWNPVFFAKYAPAYL
CCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SGLGVTLSLVAISMVLGAVLSMPVAYGRMSRNRILSGLAYCYVYFFRGTPLLVQTFLIYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GLGSFRPELQMIGLWDFFKDAFNCGVFAFALNTAAYQAEILRGAIESVHRGQWEGAASLG
CCCCCCCCHHEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LHKLQTLRKIILPQALIVALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFDIQ
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCHH
AYIWVALVYLVMVELLRHAIEWIERRITIHLKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]