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The map label for this gene is nocQ [H]

Identifier: 13470759

GI number: 13470759

Start: 404877

End: 405596

Strand: Direct

Name: nocQ [H]

Synonym: mlr0550

Alternate gene names: 13470759

Gene position: 404877-405596 (Clockwise)

Preceding gene: 13470758

Following gene: 13470760

Centisome position: 5.75

GC content: 59.72

Gene sequence:

>720_bases
ATGCCAGCCCAAAGCATATGGACACTTCTCAGTTGGGGACCTGACGGCTGGAGTGACGACATTGCCTATGGCGTCATTGT
AACGGTTCTGCTCGCGCTGGCGACGCTCCCCATTGGGTTGACGATTGGCTTTTTCATTGCGCTCGGCAAGCAGTCCGAGG
AGCCGTCGCTGCGCCTCGCCGCCAATATCTACACCACGGTCTTTCGCGGCCTGCCGGAACTGGTGACGCTTTTCCTGTTC
TTCTTCGGCATGCCGATCCTGCTGCAGCATCTCATCCGGTATTTCCGCCCCGAGGCGACCATCGACGTCAACAGCTTCGT
CGCCGGCATGATCGTGCTCTCGCTGATCTTCTCGTCCTATGCCAGCGAGGTTTTCCTCTCGGCCTTCCGCGCCATCCCGA
AGGGGCAGTATGAGGGTGGCTATTCCATTGGTCTGTCCAAATGGCAGACCATGCGCCTGGTGATCCTGCCGCAGCTGTTG
CGCATTGCCTTCCCCGGCCTCGAGAACTGCTGGCTCAGCCTGCTCAAGGACACGTCGCTGGTTTCGGTCGTCGGTCTTGC
CGAGACACTGCGCAATGCCGGCGTGGCGGCTCGCGTCACCAAACATTCGTTCCTGTTTTACAGCATTGCGGCTCTGGTCT
TTCTCGGTCTGGCCGTCGTGTCATCCTTCGCCACCGGTGCCATTTTGCGCTCGCTTGGCAAACGGGAGGCACAACGATGA

Upstream 100 bases:

>100_bases
CGTCTTCGGCGCCGAGTCCTGATAGACGGATCAAGACGGCGGGGAAATTCCCCGCCGTCTTTCTATTCATCTTGGAACGC
CGTGGAGATAAGACCCGTCA

Downstream 100 bases:

>100_bases
GCGCCACCGCCGCCATGGTCGAACGGCCGCCACCGCGGACCCGCGGCTGGCCGCGACCGCGCATCGTCGGCTACGCGCTG
GTCTGCCTATGGATCGCCTT

Product: ABC transporter permease

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MPAQSIWTLLSWGPDGWSDDIAYGVIVTVLLALATLPIGLTIGFFIALGKQSEEPSLRLAANIYTTVFRGLPELVTLFLF
FFGMPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIFSSYASEVFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLL
RIAFPGLENCWLSLLKDTSLVSVVGLAETLRNAGVAARVTKHSFLFYSIAALVFLGLAVVSSFATGAILRSLGKREAQR

Sequences:

>Translated_239_residues
MPAQSIWTLLSWGPDGWSDDIAYGVIVTVLLALATLPIGLTIGFFIALGKQSEEPSLRLAANIYTTVFRGLPELVTLFLF
FFGMPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIFSSYASEVFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLL
RIAFPGLENCWLSLLKDTSLVSVVGLAETLRNAGVAARVTKHSFLFYSIAALVFLGLAVVSSFATGAILRSLGKREAQR
>Mature_238_residues
PAQSIWTLLSWGPDGWSDDIAYGVIVTVLLALATLPIGLTIGFFIALGKQSEEPSLRLAANIYTTVFRGLPELVTLFLFF
FGMPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIFSSYASEVFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLLR
IAFPGLENCWLSLLKDTSLVSVVGLAETLRNAGVAARVTKHSFLFYSIAALVFLGLAVVSSFATGAILRSLGKREAQR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788646, Length=207, Percent_Identity=34.2995169082126, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=33.953488372093, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787087, Length=209, Percent_Identity=33.4928229665072, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87082239, Length=194, Percent_Identity=32.9896907216495, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788645, Length=234, Percent_Identity=28.6324786324786, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786873, Length=171, Percent_Identity=29.8245614035088, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=29.7169811320755, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786874, Length=201, Percent_Identity=24.8756218905473, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26184; Mature: 26053

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQSIWTLLSWGPDGWSDDIAYGVIVTVLLALATLPIGLTIGFFIALGKQSEEPSLRLA
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ANIYTTVFRGLPELVTLFLFFFGMPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIFSSY
HHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ASEVFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLLRIAFPGLENCWLSLLKDTSL
HHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VSVVGLAETLRNAGVAARVTKHSFLFYSIAALVFLGLAVVSSFATGAILRSLGKREAQR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAQSIWTLLSWGPDGWSDDIAYGVIVTVLLALATLPIGLTIGFFIALGKQSEEPSLRLA
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ANIYTTVFRGLPELVTLFLFFFGMPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIFSSY
HHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ASEVFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLLRIAFPGLENCWLSLLKDTSL
HHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VSVVGLAETLRNAGVAARVTKHSFLFYSIAALVFLGLAVVSSFATGAILRSLGKREAQR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]