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The map label for this gene is ubiF [C]

Identifier: 13470729

GI number: 13470729

Start: 377031

End: 378245

Strand: Direct

Name: ubiF [C]

Synonym: mlr0511

Alternate gene names: 13470729

Gene position: 377031-378245 (Clockwise)

Preceding gene: 13470728

Following gene: 13470730

Centisome position: 5.36

GC content: 65.1

Gene sequence:

>1215_bases
TTGGAGCATCAGGAAACAGCGCGAATACTGATTGCCGGAACCGGTCCGGCGGGGCTGATCGCGGCGCTGGCTTTCGCCGA
TGCCGGCTTCCCGGTGACGCTGGTCGGGCCTGAGGCGTCAGCCCCCGATGGCCGCACCACTGCGCTGATGAACCCTGCCC
TGAAAGTGCTTGAGCGGCTCGACGTCCTCGAAGCCATCAGGCCCAAGGCCGCTCCCTTGAAAGTCATGCGCATCGTCGAC
GCGACCAGCCGGCTGATCCGCAGCCCCGTCGTTACCTTCCGCGCAAGCGAGATCGATGAGGACCAGTTCGGGCTGAACCT
GCCCAACAGCGTCTTTGGCCCGGCGCTTGCCGACAAGGTGGCCGCCCATCCCGGGATCGAATGGCGCAGGTCGATGGTGA
AGACCTGGCATCTCGATGCCGATCGGGCTCATGCCGTTCTCGCCGACGGCAGCGAGGTTGGCGCGTCACTGGCGGTCGCC
GCCGATGGACGCCAGTCGCCTGCGCGTGAGGCGGCGGGCATTTCGACCGGTTCGCACGCCTATCCGCAGGCCGCGCTCGT
GCTTAATTTCGGCCATAGAAGCGAGCATGCCTTCACCTCGACCGAGTTCCACACAGAAACCGGTCCGTTCACACAGGTTC
CGTTGCCTGGCAATCGCTCAAGCCTCGTCTGGGTGGTGAAGCCCGAGACCGCCAAGGAGCTTGCCGCACTGGATGACGCA
ACGCTCTCGCTGCGGGTCGAGCAGCAAATGCAATCGATGCTGGGTCGGGTGACGGTAGAGCCGGGCCGCCAGATCTACCC
GCTTTCGACCGTGACGCCCCTGCGCTTCGCGCGAGACAGGGTGGCGCTTGTCGGCGAAGCCGCGCATGTGTTCCCGCCGA
TCGGTGCGCAAGGCCTCAACCTTGGCATCAGGGATATCGACGATCTGGTTGGAATTGCAAAAGAAAACGGTGGAGATCCA
GGCGCGGCCAAGGCCCTTGCCGCCTACGATTTCAAGCGCCGGCCCGATATTCTGGCGCGCAGCAGCGCAGTCAACCTGCT
CAACCTGTCGCTGCTCTCCGATATGCTGCCGGCGCAGATGGCACGCGGCGCCGGTCTCGGCGTGCTCGGCGGCTTTGCAC
CGCTGCGCGCCTTCTTCATGCGCGAAGGCCTTCGTCCCGGCAGTGGTTTTGCAGCACTCGCAGGCGGCCTACGAAAACCC
ATGCGGCGGCAGTAG

Upstream 100 bases:

>100_bases
AGCCGAATCGCCGCGTTGATCAATCCGCATGAACTGACCTATATGCTTCTCGATTGGCAGGTCTGGTGGCCCGCCTCGCA
TCGCAAGCCGGAAACCGATC

Downstream 100 bases:

>100_bases
CGATCTTGCGGATTTTATCGCGACATCGCGACATCAATCAAAACCTTTGCGCCGCATTCTGCGTAGCTTGAAGGCGCTTA
AACGCTTCGGGATTGAATTG

Product: 2-octaprenyl-6-methoxyphenyl hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MEHQETARILIAGTGPAGLIAALAFADAGFPVTLVGPEASAPDGRTTALMNPALKVLERLDVLEAIRPKAAPLKVMRIVD
ATSRLIRSPVVTFRASEIDEDQFGLNLPNSVFGPALADKVAAHPGIEWRRSMVKTWHLDADRAHAVLADGSEVGASLAVA
ADGRQSPAREAAGISTGSHAYPQAALVLNFGHRSEHAFTSTEFHTETGPFTQVPLPGNRSSLVWVVKPETAKELAALDDA
TLSLRVEQQMQSMLGRVTVEPGRQIYPLSTVTPLRFARDRVALVGEAAHVFPPIGAQGLNLGIRDIDDLVGIAKENGGDP
GAAKALAAYDFKRRPDILARSSAVNLLNLSLLSDMLPAQMARGAGLGVLGGFAPLRAFFMREGLRPGSGFAALAGGLRKP
MRRQ

Sequences:

>Translated_404_residues
MEHQETARILIAGTGPAGLIAALAFADAGFPVTLVGPEASAPDGRTTALMNPALKVLERLDVLEAIRPKAAPLKVMRIVD
ATSRLIRSPVVTFRASEIDEDQFGLNLPNSVFGPALADKVAAHPGIEWRRSMVKTWHLDADRAHAVLADGSEVGASLAVA
ADGRQSPAREAAGISTGSHAYPQAALVLNFGHRSEHAFTSTEFHTETGPFTQVPLPGNRSSLVWVVKPETAKELAALDDA
TLSLRVEQQMQSMLGRVTVEPGRQIYPLSTVTPLRFARDRVALVGEAAHVFPPIGAQGLNLGIRDIDDLVGIAKENGGDP
GAAKALAAYDFKRRPDILARSSAVNLLNLSLLSDMLPAQMARGAGLGVLGGFAPLRAFFMREGLRPGSGFAALAGGLRKP
MRRQ
>Mature_404_residues
MEHQETARILIAGTGPAGLIAALAFADAGFPVTLVGPEASAPDGRTTALMNPALKVLERLDVLEAIRPKAAPLKVMRIVD
ATSRLIRSPVVTFRASEIDEDQFGLNLPNSVFGPALADKVAAHPGIEWRRSMVKTWHLDADRAHAVLADGSEVGASLAVA
ADGRQSPAREAAGISTGSHAYPQAALVLNFGHRSEHAFTSTEFHTETGPFTQVPLPGNRSSLVWVVKPETAKELAALDDA
TLSLRVEQQMQSMLGRVTVEPGRQIYPLSTVTPLRFARDRVALVGEAAHVFPPIGAQGLNLGIRDIDDLVGIAKENGGDP
GAAKALAAYDFKRRPDILARSSAVNLLNLSLLSDMLPAQMARGAGLGVLGGFAPLRAFFMREGLRPGSGFAALAGGLRKP
MRRQ

Specific function: Oxygenase That Introduces The Hydroxyl Group At Carbon Five Of 2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol Resulting In The Formation Of 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Escherichia coli, GI1786883, Length=380, Percent_Identity=28.1578947368421, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1789274, Length=383, Percent_Identity=27.154046997389, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1789273, Length=344, Percent_Identity=27.3255813953488, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 42807; Mature: 42807

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHQETARILIAGTGPAGLIAALAFADAGFPVTLVGPEASAPDGRTTALMNPALKVLERL
CCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
DVLEAIRPKAAPLKVMRIVDATSRLIRSPVVTFRASEIDEDQFGLNLPNSVFGPALADKV
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCHHCCCCCCCHHCCHHHHHHH
AAHPGIEWRRSMVKTWHLDADRAHAVLADGSEVGASLAVAADGRQSPAREAAGISTGSHA
HCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHCCEEEEEECCCCCCHHHHCCCCCCCCC
YPQAALVLNFGHRSEHAFTSTEFHTETGPFTQVPLPGNRSSLVWVVKPETAKELAALDDA
CCCEEEEEECCCCCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHCCC
TLSLRVEQQMQSMLGRVTVEPGRQIYPLSTVTPLRFARDRVALVGEAAHVFPPIGAQGLN
CEEEEHHHHHHHHHCCEEECCCCEEECCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC
LGIRDIDDLVGIAKENGGDPGAAKALAAYDFKRRPDILARSSAVNLLNLSLLSDMLPAQM
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARGAGLGVLGGFAPLRAFFMREGLRPGSGFAALAGGLRKPMRRQ
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEHQETARILIAGTGPAGLIAALAFADAGFPVTLVGPEASAPDGRTTALMNPALKVLERL
CCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
DVLEAIRPKAAPLKVMRIVDATSRLIRSPVVTFRASEIDEDQFGLNLPNSVFGPALADKV
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCHHCCCCCCCHHCCHHHHHHH
AAHPGIEWRRSMVKTWHLDADRAHAVLADGSEVGASLAVAADGRQSPAREAAGISTGSHA
HCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHCCEEEEEECCCCCCHHHHCCCCCCCCC
YPQAALVLNFGHRSEHAFTSTEFHTETGPFTQVPLPGNRSSLVWVVKPETAKELAALDDA
CCCEEEEEECCCCCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHCCC
TLSLRVEQQMQSMLGRVTVEPGRQIYPLSTVTPLRFARDRVALVGEAAHVFPPIGAQGLN
CEEEEHHHHHHHHHCCEEECCCCEEECCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC
LGIRDIDDLVGIAKENGGDPGAAKALAAYDFKRRPDILARSSAVNLLNLSLLSDMLPAQM
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARGAGLGVLGGFAPLRAFFMREGLRPGSGFAALAGGLRKPMRRQ
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydroxylation [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]