Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470728
Identifier: 13470728
GI number: 13470728
Start: 376907
End: 377143
Strand: Direct
Name: 13470728
Synonym: msr0510
Alternate gene names: NA
Gene position: 376907-377143 (Clockwise)
Preceding gene: 13470719
Following gene: 13470729
Centisome position: 5.36
GC content: 62.03
Gene sequence:
>237_bases GTGGCCGGTCATGATACCCGAATGAGCCGAATCGCCGCGTTGATCAATCCGCATGAACTGACCTATATGCTTCTCGATTG GCAGGTCTGGTGGCCCGCCTCGCATCGCAAGCCGGAAACCGATCTTGGAGCATCAGGAAACAGCGCGAATACTGATTGCC GGAACCGGTCCGGCGGGGCTGATCGCGGCGCTGGCTTTCGCCGATGCCGGCTTCCCGGTGACGCTGGTCGGGCCTGA
Upstream 100 bases:
>100_bases GAATGCTGGCGCCGACGACGATATTGACCGTCAAACGTGGGTTGCGCGCAACATCAGCCGTGGCGCGGCCGGCGCGGTCG AGATGGCTGAAATCGTCCTG
Downstream 100 bases:
>100_bases GGCGTCAGCCCCCGATGGCCGCACCACTGCGCTGATGAACCCTGCCCTGAAAGTGCTTGAGCGGCTCGACGTCCTCGAAG CCATCAGGCCCAAGGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MAGHDTRMSRIAALINPHELTYMLLDWQVWWPASHRKPETDLGASGNSANTDCRNRSGGADRGAGFRRCRLPGDAGRA
Sequences:
>Translated_78_residues MAGHDTRMSRIAALINPHELTYMLLDWQVWWPASHRKPETDLGASGNSANTDCRNRSGGADRGAGFRRCRLPGDAGRA >Mature_77_residues AGHDTRMSRIAALINPHELTYMLLDWQVWWPASHRKPETDLGASGNSANTDCRNRSGGADRGAGFRRCRLPGDAGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8579; Mature: 8447
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGHDTRMSRIAALINPHELTYMLLDWQVWWPASHRKPETDLGASGNSANTDCRNRSGGA CCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRGAGFRRCRLPGDAGRA CCCCCCEEEECCCCCCCC >Mature Secondary Structure AGHDTRMSRIAALINPHELTYMLLDWQVWWPASHRKPETDLGASGNSANTDCRNRSGGA CCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRGAGFRRCRLPGDAGRA CCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA