Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470711
Identifier: 13470711
GI number: 13470711
Start: 360340
End: 360933
Strand: Direct
Name: 13470711
Synonym: mlr0488
Alternate gene names: NA
Gene position: 360340-360933 (Clockwise)
Preceding gene: 13470704
Following gene: 13470714
Centisome position: 5.12
GC content: 58.08
Gene sequence:
>594_bases GTGTCCAATGCAGCGACACTTCAAAACGAAGGAGGAATAGTCATGCTTATTAATCGTCGCCGCGTTCTCGAAGTCGCGGC CGCACTTCCGATCATTTCGGTCGCGTCGTCTATCACAACCTCTGCCGCATCCGCAGCGGCCTTCGACTTCTCCAGCATCA AGACTGTCAAGCAATTTGGTGCCGAAGTCATAGGCCGCGCTGACCTATCGCGAGCGGCTTGTGAGGTTGCGCTGAAAAAG GCGACGCGTGCCGATGCCAAGGAGTTCGCCGGCTTCGAGCTAAAGGAGGCCGAGACAGTCATCGCTGTGTTGAAGGAACT TGGAACCCCGTTGCCTCCGATGGGCGACGCCGCGAAAAGCGCGCTCGAACACATCGCCGGTTCGGCGGCAGGCACTGCGT TTGACACAGCCTATATCGGGGCAGAGTACGAAAACCATGCCTTCTTGCGCGACTTAGCGGAAGCCTATCTGAAGAATTCT GACCCGTCGGACCCATCTGAACAGCATGGGCGCCAGCTCGCGACAGTCGCACATTGGGCTTTCTGGGAACACACTGCTCT CACTCAGCGAATCGCCCGCGAATTGGCGGCCTAG
Upstream 100 bases:
>100_bases CGTCCTCTGGTCAAGCCTTCCTCGACACAAGAGCCGAAACGTCCAAAACGCGACTAAACCGTGCAATCCCGACTTTGCCT CCAGTCGATAGCATTTCGTC
Downstream 100 bases:
>100_bases ACACCGCTTCAGCTGGCGTCTCATCATTGCCGAGCGCGTTTGAGTACGCGCTCGGCGACCTATAGATTTCGCGCTCGCCG CCATGTGGCTGGGCTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSNAATLQNEGGIVMLINRRRVLEVAAALPIISVASSITTSAASAAAFDFSSIKTVKQFGAEVIGRADLSRAACEVALKK ATRADAKEFAGFELKEAETVIAVLKELGTPLPPMGDAAKSALEHIAGSAAGTAFDTAYIGAEYENHAFLRDLAEAYLKNS DPSDPSEQHGRQLATVAHWAFWEHTALTQRIARELAA
Sequences:
>Translated_197_residues MSNAATLQNEGGIVMLINRRRVLEVAAALPIISVASSITTSAASAAAFDFSSIKTVKQFGAEVIGRADLSRAACEVALKK ATRADAKEFAGFELKEAETVIAVLKELGTPLPPMGDAAKSALEHIAGSAAGTAFDTAYIGAEYENHAFLRDLAEAYLKNS DPSDPSEQHGRQLATVAHWAFWEHTALTQRIARELAA >Mature_196_residues SNAATLQNEGGIVMLINRRRVLEVAAALPIISVASSITTSAASAAAFDFSSIKTVKQFGAEVIGRADLSRAACEVALKKA TRADAKEFAGFELKEAETVIAVLKELGTPLPPMGDAAKSALEHIAGSAAGTAFDTAYIGAEYENHAFLRDLAEAYLKNSD PSDPSEQHGRQLATVAHWAFWEHTALTQRIARELAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20870; Mature: 20739
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAATLQNEGGIVMLINRRRVLEVAAALPIISVASSITTSAASAAAFDFSSIKTVKQFG CCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEVIGRADLSRAACEVALKKATRADAKEFAGFELKEAETVIAVLKELGTPLPPMGDAAKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH ALEHIAGSAAGTAFDTAYIGAEYENHAFLRDLAEAYLKNSDPSDPSEQHGRQLATVAHWA HHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH FWEHTALTQRIARELAA HHHHHHHHHHHHHHHCC >Mature Secondary Structure SNAATLQNEGGIVMLINRRRVLEVAAALPIISVASSITTSAASAAAFDFSSIKTVKQFG CCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEVIGRADLSRAACEVALKKATRADAKEFAGFELKEAETVIAVLKELGTPLPPMGDAAKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH ALEHIAGSAAGTAFDTAYIGAEYENHAFLRDLAEAYLKNSDPSDPSEQHGRQLATVAHWA HHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH FWEHTALTQRIARELAA HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA