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The map label for this gene is 13470714

Identifier: 13470714

GI number: 13470714

Start: 362981

End: 363928

Strand: Direct

Name: 13470714

Synonym: mlr0492

Alternate gene names: NA

Gene position: 362981-363928 (Clockwise)

Preceding gene: 13470711

Following gene: 13470715

Centisome position: 5.16

GC content: 58.65

Gene sequence:

>948_bases
GTGACACTCTGGTCAGCGCCTCAATTCCATGGCTCGGCCACGCGTGTGGCTCGGACACCGGCATCAAGCCTTTGGAAAGG
AGAAATGTGGTTCTCTCCGGAAGCTGAGGCGCGAGCGGTGCTGGCCAGAGGCGGCAATAGAGGCGGGCGAATGGATATAT
TTGGCATCAAGGGGCTGTTGATCTGCGCGCTGATCTTCATTCCGTTCGAACATCTTTTCCACGAACGGCCCCAGAAGGCC
CTGCGCAAGGGTCTGGGTGTTGATCTGATCTATGTGCTGTTCAATGGGCTTATCGTAAAAGTGGTCATCGTTCTGATCGC
GGCCAACACACTCGAAGCCGCCGCGATGCTCGTTCCGCAATCGATCACGCAGGCCGTCGGCGGCCAGCCGGTCTGGCTGC
AGGTTCCCGAAATCATCCTGATCACCGATATCGGCGTCTACTGGGCACACCGGGCCTTCCACACAATCCCTGCGCTTTGG
AAATTTCATGCGGTGCACCACGGCATCGAGGAGCTGGACTGGCTCGGTGCTTTCCACTCCCACCCGTTCGACGCCATCCT
CACAAAGGCATTGTCGCTGACGCCGATCTTTTTCCTCGGCTTCTCCGAAGCCTCCATCGCCGTCTTTTCAGTCATCTACT
TCTGGCACACGCTGCTTGTTCATTCGAACGTGCGGATACCGTTCGGCCCCTTGAAGTGGCTGATCGCCAGCCCGCAGTTC
CATCGCTGGCACCATGCCAACCAGCGCGAGGCCTATGACAAGAACTTCGCCGGGCAATTGCCTGTCCTCGACATGGTGTT
CGGCACCTACAATGCCACCGGCGACAAGGTGCCGGAAAAATACGGCGTCGATGATCCGATCCCCTCCAGCTATTTCGGGC
AGGTCAGCTATCCGCTCCTGTCGGGCGAGAAGCGATCGAACCGTCCAGTGCCGAGCACCAAAGCCTGA

Upstream 100 bases:

>100_bases
CCGGCAGGGAACCGGAGGGGTTAGTCCTGGGAGGACGCGCGGCGCGCGCTGCGCTCATCGACCGCGCCTTGTCCACATAT
CCCCGGGTTGCGACACGGAT

Downstream 100 bases:

>100_bases
CGGCTGACACCGACGGCGCAAGACTTTTGTCGCTCCAAACTGGCGGTGTCGCCAGGTGGCAGCAGACGTTCTATCGCGGG
TTGGCTTTGGCTGATGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase Family Protein; Sterol Desaturase-Related Protein; C-5 Sterol Desaturase; Sterol Desaturase-Like Protein; Transmembrane Protein; Sterol Desaturase-Like; TRAP Dicarboxylate Transporter; Sterol Desaturase Protein; Sterol Desaturase -Like Protein; Sterol Desaturate; TRAP Dicarboxylate Transporter DctM Subunit; Fatty Acid Hydroxylase Superfamily Protein; YhhN-Like Protein; TRAP Dicarboxylate Transporter Subunit DctM; Methyltransferase Type; Transmembrane Fatty Acid Synthesis Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTLWSAPQFHGSATRVARTPASSLWKGEMWFSPEAEARAVLARGGNRGGRMDIFGIKGLLICALIFIPFEHLFHERPQKA
LRKGLGVDLIYVLFNGLIVKVVIVLIAANTLEAAAMLVPQSITQAVGGQPVWLQVPEIILITDIGVYWAHRAFHTIPALW
KFHAVHHGIEELDWLGAFHSHPFDAILTKALSLTPIFFLGFSEASIAVFSVIYFWHTLLVHSNVRIPFGPLKWLIASPQF
HRWHHANQREAYDKNFAGQLPVLDMVFGTYNATGDKVPEKYGVDDPIPSSYFGQVSYPLLSGEKRSNRPVPSTKA

Sequences:

>Translated_315_residues
MTLWSAPQFHGSATRVARTPASSLWKGEMWFSPEAEARAVLARGGNRGGRMDIFGIKGLLICALIFIPFEHLFHERPQKA
LRKGLGVDLIYVLFNGLIVKVVIVLIAANTLEAAAMLVPQSITQAVGGQPVWLQVPEIILITDIGVYWAHRAFHTIPALW
KFHAVHHGIEELDWLGAFHSHPFDAILTKALSLTPIFFLGFSEASIAVFSVIYFWHTLLVHSNVRIPFGPLKWLIASPQF
HRWHHANQREAYDKNFAGQLPVLDMVFGTYNATGDKVPEKYGVDDPIPSSYFGQVSYPLLSGEKRSNRPVPSTKA
>Mature_314_residues
TLWSAPQFHGSATRVARTPASSLWKGEMWFSPEAEARAVLARGGNRGGRMDIFGIKGLLICALIFIPFEHLFHERPQKAL
RKGLGVDLIYVLFNGLIVKVVIVLIAANTLEAAAMLVPQSITQAVGGQPVWLQVPEIILITDIGVYWAHRAFHTIPALWK
FHAVHHGIEELDWLGAFHSHPFDAILTKALSLTPIFFLGFSEASIAVFSVIYFWHTLLVHSNVRIPFGPLKWLIASPQFH
RWHHANQREAYDKNFAGQLPVLDMVFGTYNATGDKVPEKYGVDDPIPSSYFGQVSYPLLSGEKRSNRPVPSTKA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51972212, Length=148, Percent_Identity=33.7837837837838, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35153; Mature: 35022

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLWSAPQFHGSATRVARTPASSLWKGEMWFSPEAEARAVLARGGNRGGRMDIFGIKGLL
CCCCCCCCCCCCHHHHHCCCHHHHCCCCCEECCCHHHHHHHHCCCCCCCEEEEEHHHHHH
ICALIFIPFEHLFHERPQKALRKGLGVDLIYVLFNGLIVKVVIVLIAANTLEAAAMLVPQ
HHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SITQAVGGQPVWLQVPEIILITDIGVYWAHRAFHTIPALWKFHAVHHGIEELDWLGAFHS
HHHHHHCCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPFDAILTKALSLTPIFFLGFSEASIAVFSVIYFWHTLLVHSNVRIPFGPLKWLIASPQF
CCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCH
HRWHHANQREAYDKNFAGQLPVLDMVFGTYNATGDKVPEKYGVDDPIPSSYFGQVSYPLL
HHHHCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHCCCCCCCCC
SGEKRSNRPVPSTKA
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLWSAPQFHGSATRVARTPASSLWKGEMWFSPEAEARAVLARGGNRGGRMDIFGIKGLL
CCCCCCCCCCCHHHHHCCCHHHHCCCCCEECCCHHHHHHHHCCCCCCCEEEEEHHHHHH
ICALIFIPFEHLFHERPQKALRKGLGVDLIYVLFNGLIVKVVIVLIAANTLEAAAMLVPQ
HHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SITQAVGGQPVWLQVPEIILITDIGVYWAHRAFHTIPALWKFHAVHHGIEELDWLGAFHS
HHHHHHCCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPFDAILTKALSLTPIFFLGFSEASIAVFSVIYFWHTLLVHSNVRIPFGPLKWLIASPQF
CCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCH
HRWHHANQREAYDKNFAGQLPVLDMVFGTYNATGDKVPEKYGVDDPIPSSYFGQVSYPLL
HHHHCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHCCCCCCCCC
SGEKRSNRPVPSTKA
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA