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The map label for this gene is 13470642

Identifier: 13470642

GI number: 13470642

Start: 294697

End: 295470

Strand: Direct

Name: 13470642

Synonym: mlr0408

Alternate gene names: NA

Gene position: 294697-295470 (Clockwise)

Preceding gene: 13470641

Following gene: 13470643

Centisome position: 4.19

GC content: 66.8

Gene sequence:

>774_bases
ATGAGCGCTCTTGTCGACCCTGTGACGGACACCGATCTCGACGCCTATGTCGACGACCAGCTGGATGTCACCCGCCGCAT
CGAGGTCGAAGCCTTCCTGTCGACACGTCCAGAGGCCGCCGCGCGCGTCATGTCGGATCTGCGGACCCGCGATGAACTGC
GCGTGGCGCTTGCTGGTTCCAAGGGCATGGCGCGGCCGGCGACTGCTGACGCGGCGCGGCGGCTGGAGAGGGGACTTGCC
CGTGGCCGCATCTTCGGCGTGTTGCAGCGCTCCGCTGCCGTTGCCGCCTTCGTTGCCGCTGGCTGGCTGGCGAACGGTAT
CATCGGGCCGATGTCGGTGACCAAGGTCGTCGCGTCGCCGCAGCCGCCCGCCTATGTCGACGAAGCGGTGCGGGCACACA
GGACGACGTTGGTGCGCGAAACCATGCCCTCGCAGCCGGAAGCGCCCAACTACAGTGCCGGCGAGATCCGTGCGGCGACC
GCGATCGTCATGCCGTCGCTGCCAAAGGACTGGAAGGTGCGCGACGTGCAGATCTATCCGTCGCGCTTCGGCCCGAGCGT
CGAGATGGCTGTCGACACCAAGGATATGGGCCTGGTGTCGCTGTTTGCGATCCGGCCGGGAACCTTCGACGTGGTCAAGC
CGACCGTCGCACCCTCGGGCGACATTTCCTCGGCCTATTTCCAGATCGGCGAGGTCGCCTACGCGGTGGTCGCCAAGAGC
GGGGTTCGTGATCTCGACCGCGCCGCCGAGACGCTTGCCAGAACGCTTTACTGA

Upstream 100 bases:

>100_bases
TGATGTCACGCATCGGCAGGGCACGCGCCGCCCTGCGTCAGATGGAAGACGCCGCCCCGGCGCGCGGAAAAAATCATCTC
AGGATCGTGGGAGGTGAGCC

Downstream 100 bases:

>100_bases
CCGATTCACAAAAGGAGACTGCAAATGAACACGCCCAATCTGGGATATCGTGTCGGCACCGGCGCCCAGGCCGGAGCCGT
CTTTGACGAGGGTCTGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Regulator; Transcriptional Regulator

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSALVDPVTDTDLDAYVDDQLDVTRRIEVEAFLSTRPEAAARVMSDLRTRDELRVALAGSKGMARPATADAARRLERGLA
RGRIFGVLQRSAAVAAFVAAGWLANGIIGPMSVTKVVASPQPPAYVDEAVRAHRTTLVRETMPSQPEAPNYSAGEIRAAT
AIVMPSLPKDWKVRDVQIYPSRFGPSVEMAVDTKDMGLVSLFAIRPGTFDVVKPTVAPSGDISSAYFQIGEVAYAVVAKS
GVRDLDRAAETLARTLY

Sequences:

>Translated_257_residues
MSALVDPVTDTDLDAYVDDQLDVTRRIEVEAFLSTRPEAAARVMSDLRTRDELRVALAGSKGMARPATADAARRLERGLA
RGRIFGVLQRSAAVAAFVAAGWLANGIIGPMSVTKVVASPQPPAYVDEAVRAHRTTLVRETMPSQPEAPNYSAGEIRAAT
AIVMPSLPKDWKVRDVQIYPSRFGPSVEMAVDTKDMGLVSLFAIRPGTFDVVKPTVAPSGDISSAYFQIGEVAYAVVAKS
GVRDLDRAAETLARTLY
>Mature_256_residues
SALVDPVTDTDLDAYVDDQLDVTRRIEVEAFLSTRPEAAARVMSDLRTRDELRVALAGSKGMARPATADAARRLERGLAR
GRIFGVLQRSAAVAAFVAAGWLANGIIGPMSVTKVVASPQPPAYVDEAVRAHRTTLVRETMPSQPEAPNYSAGEIRAATA
IVMPSLPKDWKVRDVQIYPSRFGPSVEMAVDTKDMGLVSLFAIRPGTFDVVKPTVAPSGDISSAYFQIGEVAYAVVAKSG
VRDLDRAAETLARTLY

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27620; Mature: 27489

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALVDPVTDTDLDAYVDDQLDVTRRIEVEAFLSTRPEAAARVMSDLRTRDELRVALAGS
CCCCCCCCCCCCCHHHHCCCCCHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECC
KGMARPATADAARRLERGLARGRIFGVLQRSAAVAAFVAAGWLANGIIGPMSVTKVVASP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
QPPAYVDEAVRAHRTTLVRETMPSQPEAPNYSAGEIRAATAIVMPSLPKDWKVRDVQIYP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCEEEEEEEC
SRFGPSVEMAVDTKDMGLVSLFAIRPGTFDVVKPTVAPSGDISSAYFQIGEVAYAVVAKS
CCCCCCEEEEECCCCCCEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
GVRDLDRAAETLARTLY
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SALVDPVTDTDLDAYVDDQLDVTRRIEVEAFLSTRPEAAARVMSDLRTRDELRVALAGS
CCCCCCCCCCCCHHHHCCCCCHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECC
KGMARPATADAARRLERGLARGRIFGVLQRSAAVAAFVAAGWLANGIIGPMSVTKVVASP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
QPPAYVDEAVRAHRTTLVRETMPSQPEAPNYSAGEIRAATAIVMPSLPKDWKVRDVQIYP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCEEEEEEEC
SRFGPSVEMAVDTKDMGLVSLFAIRPGTFDVVKPTVAPSGDISSAYFQIGEVAYAVVAKS
CCCCCCEEEEECCCCCCEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
GVRDLDRAAETLARTLY
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA