The gene/protein map for NC_002678 is currently unavailable.
Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470613

Identifier: 13470613

GI number: 13470613

Start: 266413

End: 267090

Strand: Direct

Name: 13470613

Synonym: mlr0376

Alternate gene names: NA

Gene position: 266413-267090 (Clockwise)

Preceding gene: 13470612

Following gene: 13470615

Centisome position: 3.79

GC content: 57.82

Gene sequence:

>678_bases
ATGAGCGTTTTGGCAGGAGGAAGCCATGTCCGTCGCCCGCGTCACCGAAATCACCTCATCGTCAAAGAAGAGTTTTCAGG
ACGCCATCGAGAAGGGAATCGCCCGCGCGTCGAAAACCCTGAAGAACGTCGAAGGCGCCTGGATCCAGGATCAGAAGATC
GTCGTCGAGGACGGCAAGATCGCTGCCTATCGCGTCAACATGAAGGTGACTTTCATCCTCGCGGAGTGATTGGCCGCCGC
CGAAAAAGTCGGGAACTTTCGCCCGTCCTCCTCATTGTCGAAGCAGAGTTCAACGACAACGAGGAGCAGATCATGACAAC
ACAGACAGGCCACACCGAAGCCATTGCCGCTTCGCGCGTCATCGGCACGTCGGTCTACAATACTGAAGGCAGGAGCATCG
GCAGCATCGAGGACATCATGCTCGACAAGACGTCGAACGGCATCATGTTCGCGGTGATCGGCTTTGGCGGCTTTCTCGGC
ATCGGCGAGAAGTACCACGCCATTCCCTGGGCCAGTCTCGACTACGACGAGAACAGGGGCGGTTATGTCGTGCCCTTCTC
GAAGGAGCAGCTGAAAGCAGCACCCGCCTATTCGATCAACGAATTGGCCGGCGCGGATGGCGAGGCGGCGCGCGACGCAT
CCTATGAGTATTACAAGGTCACGCCCTACTGGCATTGA

Upstream 100 bases:

>100_bases
AAGGCTGATGGCTTTCGACCGGATCGCGAAGGGCCGCTGAACCAGCGATTCCTGCCGCTGCTTGTGGTCAAGAGGGGCCA
GTTGTACGCTTGGCCGGCAA

Downstream 100 bases:

>100_bases
CGCAATCACAATCAAAAAGGGCCCCGTCTCGACGGGGCCCTTTTTATTCAACGCGAACGCCTATTCGCTGGTGCTCAACG
CCGACAAAGGCGCAAGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: PRC-Barrel; PRC-Barrel Domain Protein; PRC-Barrel Protein; Antigen

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSVLAGGSHVRRPRHRNHLIVKEEFSGRHREGNRPRVENPEERRRRLDPGSEDRRRGRQDRCLSRQHEGDFHPRGVIGRR
RKSRELSPVLLIVEAEFNDNEEQIMTTQTGHTEAIAASRVIGTSVYNTEGRSIGSIEDIMLDKTSNGIMFAVIGFGGFLG
IGEKYHAIPWASLDYDENRGGYVVPFSKEQLKAAPAYSINELAGADGEAARDASYEYYKVTPYWH

Sequences:

>Translated_225_residues
MSVLAGGSHVRRPRHRNHLIVKEEFSGRHREGNRPRVENPEERRRRLDPGSEDRRRGRQDRCLSRQHEGDFHPRGVIGRR
RKSRELSPVLLIVEAEFNDNEEQIMTTQTGHTEAIAASRVIGTSVYNTEGRSIGSIEDIMLDKTSNGIMFAVIGFGGFLG
IGEKYHAIPWASLDYDENRGGYVVPFSKEQLKAAPAYSINELAGADGEAARDASYEYYKVTPYWH
>Mature_224_residues
SVLAGGSHVRRPRHRNHLIVKEEFSGRHREGNRPRVENPEERRRRLDPGSEDRRRGRQDRCLSRQHEGDFHPRGVIGRRR
KSRELSPVLLIVEAEFNDNEEQIMTTQTGHTEAIAASRVIGTSVYNTEGRSIGSIEDIMLDKTSNGIMFAVIGFGGFLGI
GEKYHAIPWASLDYDENRGGYVVPFSKEQLKAAPAYSINELAGADGEAARDASYEYYKVTPYWH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25494; Mature: 25363

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLAGGSHVRRPRHRNHLIVKEEFSGRHREGNRPRVENPEERRRRLDPGSEDRRRGRQD
CCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCHH
RCLSRQHEGDFHPRGVIGRRRKSRELSPVLLIVEAEFNDNEEQIMTTQTGHTEAIAASRV
HHHHHHCCCCCCCCCCHHCCCCCCCCCEEEEEEEECCCCCHHEEEEECCCCHHHHHHHHH
IGTSVYNTEGRSIGSIEDIMLDKTSNGIMFAVIGFGGFLGIGEKYHAIPWASLDYDENRG
HCCEEECCCCCCCCCHHHHEEECCCCCEEEEEECCCHHHCCCCCEECCCCCCCCCCCCCC
GYVVPFSKEQLKAAPAYSINELAGADGEAARDASYEYYKVTPYWH
CEEEECCHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
SVLAGGSHVRRPRHRNHLIVKEEFSGRHREGNRPRVENPEERRRRLDPGSEDRRRGRQD
CCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCHH
RCLSRQHEGDFHPRGVIGRRRKSRELSPVLLIVEAEFNDNEEQIMTTQTGHTEAIAASRV
HHHHHHCCCCCCCCCCHHCCCCCCCCCEEEEEEEECCCCCHHEEEEECCCCHHHHHHHHH
IGTSVYNTEGRSIGSIEDIMLDKTSNGIMFAVIGFGGFLGIGEKYHAIPWASLDYDENRG
HCCEEECCCCCCCCCHHHHEEECCCCCEEEEEECCCHHHCCCCCEECCCCCCCCCCCCCC
GYVVPFSKEQLKAAPAYSINELAGADGEAARDASYEYYKVTPYWH
CEEEECCHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA