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The map label for this gene is yafS [H]

Identifier: 15602551

GI number: 15602551

Start: 796271

End: 796987

Strand: Direct

Name: yafS [H]

Synonym: PM0686

Alternate gene names: 15602551

Gene position: 796271-796987 (Clockwise)

Preceding gene: 15602545

Following gene: 15602552

Centisome position: 35.27

GC content: 39.19

Gene sequence:

>717_bases
ATGTGGTGGAACGCAAAATATCCTAACGTCATGCACTTGCCGCACAGCTGGCAACAATTACAAAATGGCAGTTGCTATTG
TAACGCACTTACCGACTATTTTTCGGCTTGGTATCCAAAAATTTTAGGTCATCATGTTTTAAAACTTGGAGGATTAAGTG
CAGAAATTCAAAGCGATTGTTTTTTGCATCATGCTATTTTACTTGCTCCCCATATCAGCCCTTCATTACAAAGCCTCGGT
TTGCAAAAAAACACCAGTGTCATCCAAGCTAATTTGACTGAACTGCCTTTTATTGAACAATCAATTGATGCTTGTATGTT
GAGTAACACATTAAATTTCAGCCAAGACCCACACCAAATCTTACGTGAAGTGACGCGTGTTCTGCGTGAAGATGGCTATT
TATTCTTGTCTCTTTTTAACCCCTTTAGTCCACTCTTATTTAAACGCCATTTACATACTGTCTCTCATTCCCCATTGCCT
GTTCGACACTATGTACCTTGGCGTATCTTAGATTGGCTGGCTTTACTTAATTTTGATATTTTAGATCAAAAGCGCTTAGT
CAGCTGGGATAAACATCGCTGCTTTCCACACCTAATTGCGATTGTGGCACGTAAACGGGTTTATCCATTAACCCTCAATC
CACAAAAAGTGCACTTCAAAAAAAACGAACTTCTCACCCCAGTTAACGCATTTAACACAAAGCTACTACGTAAATAA

Upstream 100 bases:

>100_bases
GATCACAATTATCGGTAAATTTGCTCGTCCATAGAGCCAAATGTAGTTATCATTTAGAGCTGGAATCGGTACTAGCATAA
ATTGTCCTCAAGGGGTTGTC

Downstream 100 bases:

>100_bases
GTGCAATTAAACTTGCGACAAGCCATAAACTCCCCTATTATGCCGAGCTTTAAAATCAGAAACATATCGAGATAAGCATG
TCTGAACAAACTTTTATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MWWNAKYPNVMHLPHSWQQLQNGSCYCNALTDYFSAWYPKILGHHVLKLGGLSAEIQSDCFLHHAILLAPHISPSLQSLG
LQKNTSVIQANLTELPFIEQSIDACMLSNTLNFSQDPHQILREVTRVLREDGYLFLSLFNPFSPLLFKRHLHTVSHSPLP
VRHYVPWRILDWLALLNFDILDQKRLVSWDKHRCFPHLIAIVARKRVYPLTLNPQKVHFKKNELLTPVNAFNTKLLRK

Sequences:

>Translated_238_residues
MWWNAKYPNVMHLPHSWQQLQNGSCYCNALTDYFSAWYPKILGHHVLKLGGLSAEIQSDCFLHHAILLAPHISPSLQSLG
LQKNTSVIQANLTELPFIEQSIDACMLSNTLNFSQDPHQILREVTRVLREDGYLFLSLFNPFSPLLFKRHLHTVSHSPLP
VRHYVPWRILDWLALLNFDILDQKRLVSWDKHRCFPHLIAIVARKRVYPLTLNPQKVHFKKNELLTPVNAFNTKLLRK
>Mature_238_residues
MWWNAKYPNVMHLPHSWQQLQNGSCYCNALTDYFSAWYPKILGHHVLKLGGLSAEIQSDCFLHHAILLAPHISPSLQSLG
LQKNTSVIQANLTELPFIEQSIDACMLSNTLNFSQDPHQILREVTRVLREDGYLFLSLFNPFSPLLFKRHLHTVSHSPLP
VRHYVPWRILDWLALLNFDILDQKRLVSWDKHRCFPHLIAIVARKRVYPLTLNPQKVHFKKNELLTPVNAFNTKLLRK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=247, Percent_Identity=36.8421052631579, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27726; Mature: 27726

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWNAKYPNVMHLPHSWQQLQNGSCYCNALTDYFSAWYPKILGHHVLKLGGLSAEIQSDC
CCCCCCCCCEEECCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FLHHAILLAPHISPSLQSLGLQKNTSVIQANLTELPFIEQSIDACMLSNTLNFSQDPHQI
HHHHHHHHCCCCCHHHHHCCCCCCCHHEEECCHHCCHHHHHHHHHHHHCCCCCCCCHHHH
LREVTRVLREDGYLFLSLFNPFSPLLFKRHLHTVSHSPLPVRHYVPWRILDWLALLNFDI
HHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCCCC
LDQKRLVSWDKHRCFPHLIAIVARKRVYPLTLNPQKVHFKKNELLTPVNAFNTKLLRK
CCHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MWWNAKYPNVMHLPHSWQQLQNGSCYCNALTDYFSAWYPKILGHHVLKLGGLSAEIQSDC
CCCCCCCCCEEECCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FLHHAILLAPHISPSLQSLGLQKNTSVIQANLTELPFIEQSIDACMLSNTLNFSQDPHQI
HHHHHHHHCCCCCHHHHHCCCCCCCHHEEECCHHCCHHHHHHHHHHHHCCCCCCCCHHHH
LREVTRVLREDGYLFLSLFNPFSPLLFKRHLHTVSHSPLPVRHYVPWRILDWLALLNFDI
HHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCCCC
LDQKRLVSWDKHRCFPHLIAIVARKRVYPLTLNPQKVHFKKNELLTPVNAFNTKLLRK
CCHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]