Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15602366
Identifier: 15602366
GI number: 15602366
Start: 577476
End: 577823
Strand: Direct
Name: 15602366
Synonym: PM0501
Alternate gene names: NA
Gene position: 577476-577823 (Clockwise)
Preceding gene: 15602365
Following gene: 15602367
Centisome position: 25.58
GC content: 25.86
Gene sequence:
>348_bases ATGATTATAAATGATGTTGTTGTAAGAAAAGCAACAGATATTAGAAAGGAAAATGATATAGCAAATTTCCCTAAAAAGTA CTTTACTCCATTTCATAATGTTTCAGCGATAAGTTTTGAAGTACTAAATATGGATTCTTTTAGAGGAAAGTATTGGCTTC TAAAAAATTCTTTAGCATTGAACTATCCAAATGAAAAAAAATTAAGTTTTGTTATTCAACTATCTGAACAGCCAAATCAA AAAAGCATCAAGTTTAAAGGTATTTGGAGAATACTAAATTTTTCAGGTGTTAATATTGATTTTTTTATAATAGAAAGGAA CTTTTTTATGAATCTAATTCGAAGCTGA
Upstream 100 bases:
>100_bases TTTGGGCTTTGAGAATTGGGTATATTTTTTGTTGAAGCCTCACCAGAGATAAGTATTAGCTGTAGGGGATCGTATTTTAA AGACGAAAAAGGAAATCACT
Downstream 100 bases:
>100_bases ATATAGTAGGATATGCTGAGGTCGATGTTGAGCACATAGAGTTTATGATTAAGCTGATAAATGATGTCGATTATTTATAT TTTTCTTTAGGGGAAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MIINDVVVRKATDIRKENDIANFPKKYFTPFHNVSAISFEVLNMDSFRGKYWLLKNSLALNYPNEKKLSFVIQLSEQPNQ KSIKFKGIWRILNFSGVNIDFFIIERNFFMNLIRS
Sequences:
>Translated_115_residues MIINDVVVRKATDIRKENDIANFPKKYFTPFHNVSAISFEVLNMDSFRGKYWLLKNSLALNYPNEKKLSFVIQLSEQPNQ KSIKFKGIWRILNFSGVNIDFFIIERNFFMNLIRS >Mature_115_residues MIINDVVVRKATDIRKENDIANFPKKYFTPFHNVSAISFEVLNMDSFRGKYWLLKNSLALNYPNEKKLSFVIQLSEQPNQ KSIKFKGIWRILNFSGVNIDFFIIERNFFMNLIRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13626; Mature: 13626
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINDVVVRKATDIRKENDIANFPKKYFTPFHNVSAISFEVLNMDSFRGKYWLLKNSLAL CCCCCCEEHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCCEEEEEECCEEE NYPNEKKLSFVIQLSEQPNQKSIKFKGIWRILNFSGVNIDFFIIERNFFMNLIRS ECCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEEECHHHHHHHCC >Mature Secondary Structure MIINDVVVRKATDIRKENDIANFPKKYFTPFHNVSAISFEVLNMDSFRGKYWLLKNSLAL CCCCCCEEHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCCEEEEEECCEEE NYPNEKKLSFVIQLSEQPNQKSIKFKGIWRILNFSGVNIDFFIIERNFFMNLIRS ECCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA