Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15602367
Identifier: 15602367
GI number: 15602367
Start: 578249
End: 578752
Strand: Direct
Name: 15602367
Synonym: PM0502
Alternate gene names: NA
Gene position: 578249-578752 (Clockwise)
Preceding gene: 15602366
Following gene: 15602368
Centisome position: 25.61
GC content: 28.77
Gene sequence:
>504_bases ATGATTTATGGGGATTATAATCAACCTTTGCAAATTCATATTGATAAAATGATTTCAGTGCCAGATGAAAAATGGGTTTA TGGTGCATTTAATTTGATTATTGATGGTTGTTTTTATCCAGGAAAAGAAATAAACTGGACATTAAATATAATTATTAATT GGTTAAAGAGCTTTTTGGATGAAGATATTAATGCGTATGATATGAAAAATTGTGAAGAGCATAGTGCAGAATATCTTTTT AGAGAAGCAGTTATTTCACGTATTGGTTATTATTATGATGAACCAGAAGAAAAAATATCCTTAGAGGAGCTCAAAAAAAT CTATCCAAAGAAAGTAGGAATTGAAATATCCCTGCCTGAAATTACTGATACGGGTTTAGAGCTTTTCTTTTTTAGGGAAA AAGAGAAAGATATTTTAGTGTTTTATTTTCAGGGTACTGTATCCAAAATTGAATTAGATATGGGTTATATTCATAAGTTA ATCGCTTCTCTTCCTGATATATAA
Upstream 100 bases:
>100_bases CTAGCTTGGAGGATAAATCTTCCCTGATGACACAGAGAGAGTTAAGAAAATTTAATTCTGAAATTAAATCTTTAAATTTA CAGTATAAGGAAAGAAAATT
Downstream 100 bases:
>100_bases CAATTTATTTTTTCTCCTAATAGTGCAAGCTTTAGCTTTTCCTTATTCATTTCTAAAGCGCGGTCAATTTTGAAAACGTT TTACTTTGAAAAATTGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MIYGDYNQPLQIHIDKMISVPDEKWVYGAFNLIIDGCFYPGKEINWTLNIIINWLKSFLDEDINAYDMKNCEEHSAEYLF REAVISRIGYYYDEPEEKISLEELKKIYPKKVGIEISLPEITDTGLELFFFREKEKDILVFYFQGTVSKIELDMGYIHKL IASLPDI
Sequences:
>Translated_167_residues MIYGDYNQPLQIHIDKMISVPDEKWVYGAFNLIIDGCFYPGKEINWTLNIIINWLKSFLDEDINAYDMKNCEEHSAEYLF REAVISRIGYYYDEPEEKISLEELKKIYPKKVGIEISLPEITDTGLELFFFREKEKDILVFYFQGTVSKIELDMGYIHKL IASLPDI >Mature_167_residues MIYGDYNQPLQIHIDKMISVPDEKWVYGAFNLIIDGCFYPGKEINWTLNIIINWLKSFLDEDINAYDMKNCEEHSAEYLF REAVISRIGYYYDEPEEKISLEELKKIYPKKVGIEISLPEITDTGLELFFFREKEKDILVFYFQGTVSKIELDMGYIHKL IASLPDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y502_PASMU (Q9CND0)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245439.1 - GeneID: 1243849 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0502 - NMPDR: fig|272843.1.peg.502 - BioCyc: PMUL272843:PM0502-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19698; Mature: 19698
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYGDYNQPLQIHIDKMISVPDEKWVYGAFNLIIDGCFYPGKEINWTLNIIINWLKSFLD CCCCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHH EDINAYDMKNCEEHSAEYLFREAVISRIGYYYDEPEEKISLEELKKIYPKKVGIEISLPE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHCCHHCCEEEECCC ITDTGLELFFFREKEKDILVFYFQGTVSKIELDMGYIHKLIASLPDI CCCCCEEEEEEECCCCCEEEEEEECCCEEEEECHHHHHHHHHHCCCC >Mature Secondary Structure MIYGDYNQPLQIHIDKMISVPDEKWVYGAFNLIIDGCFYPGKEINWTLNIIINWLKSFLD CCCCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHH EDINAYDMKNCEEHSAEYLFREAVISRIGYYYDEPEEKISLEELKKIYPKKVGIEISLPE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHCCHHCCEEEECCC ITDTGLELFFFREKEKDILVFYFQGTVSKIELDMGYIHKLIASLPDI CCCCCEEEEEEECCCCCEEEEEEECCCEEEEECHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100