Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15602075
Identifier: 15602075
GI number: 15602075
Start: 235423
End: 236142
Strand: Reverse
Name: 15602075
Synonym: PM0210
Alternate gene names: NA
Gene position: 236142-235423 (Counterclockwise)
Preceding gene: 15602076
Following gene: 15602069
Centisome position: 10.46
GC content: 42.5
Gene sequence:
>720_bases ATGCAGCCTAAATCATCGAATCTTAAAGCAACCCAAGCTGCTCTAGCTAAAGCCGTACGTCTAGGACATGCTGATCCCTT AAATGGTTATGCACCACAGCGTTTAGCCGTTTATGCTCGCTTAGTACGTAATAACACATTTGGGTTTATTGATCGCTGTT TTGTTGAAGCCCCAAATCATCTTTCAGCAACAAGGTGGGCAGAAACGAAGGAACGTTTTATCCAAGAAGGGAAAGCAACA TCCCCCTATTTCCAAGATATCGCGGGAGAATTTCTTACCTTTTGTCAGACACAAACTGATTTCTCGGCAGACATTTTAGC TTTAATGGATTTTGAATATACTCAACTGCTTGCCGAGGTAGAAAAAACGAATCTTGCTGATCCGATAGCGTGGGATGAGA GAACAGAGATGCAATTATCTCCTACGGCTTTCCTCAAAAGTTATGATGTGGACTTTTTATCAAGTCACTTTAGCCAGCTT GAAAAAGCTGCATCGCATATCATTGTTTGGCGTAACCGACATTTTCAGGTAAAACAGCAAAAACTGTCCGAATTAGATTT TTGGTTATTGACTTACCTTGCTGAGCAACCAACATCACTCTCACATCTCTCACAGGCATTGGCGGATCTCATCGCTGATC ACGCTAGCTTACAGCCGATTTTGGCACAAGCGTGGACAAATTGGTTTGAGGCAGATGTCATCTGTCCAGTTACAGACTAA
Upstream 100 bases:
>100_bases CGTGATTTTAATTTCCCTCCGTTTGCCGAGCTTTATGCTGAAGTCGAACATATTGCGCAACTGCAACAAAAACATGCTAA ACTGACAGTGGAAAATCGCC
Downstream 100 bases:
>100_bases AAAACTGTAATCCATTTGTCTTAATACAAAAACGGTGAAAATGTTTTGCATTTTCACCGCACTTTTTTATTCAGGCTTAC TCTCGTCTTTATCATGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MQPKSSNLKATQAALAKAVRLGHADPLNGYAPQRLAVYARLVRNNTFGFIDRCFVEAPNHLSATRWAETKERFIQEGKAT SPYFQDIAGEFLTFCQTQTDFSADILALMDFEYTQLLAEVEKTNLADPIAWDERTEMQLSPTAFLKSYDVDFLSSHFSQL EKAASHIIVWRNRHFQVKQQKLSELDFWLLTYLAEQPTSLSHLSQALADLIADHASLQPILAQAWTNWFEADVICPVTD
Sequences:
>Translated_239_residues MQPKSSNLKATQAALAKAVRLGHADPLNGYAPQRLAVYARLVRNNTFGFIDRCFVEAPNHLSATRWAETKERFIQEGKAT SPYFQDIAGEFLTFCQTQTDFSADILALMDFEYTQLLAEVEKTNLADPIAWDERTEMQLSPTAFLKSYDVDFLSSHFSQL EKAASHIIVWRNRHFQVKQQKLSELDFWLLTYLAEQPTSLSHLSQALADLIADHASLQPILAQAWTNWFEADVICPVTD >Mature_239_residues MQPKSSNLKATQAALAKAVRLGHADPLNGYAPQRLAVYARLVRNNTFGFIDRCFVEAPNHLSATRWAETKERFIQEGKAT SPYFQDIAGEFLTFCQTQTDFSADILALMDFEYTQLLAEVEKTNLADPIAWDERTEMQLSPTAFLKSYDVDFLSSHFSQL EKAASHIIVWRNRHFQVKQQKLSELDFWLLTYLAEQPTSLSHLSQALADLIADHASLQPILAQAWTNWFEADVICPVTD
Specific function: Unknown
COG id: COG3219
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018640 [H]
Pfam domain/function: PF09836 DUF2063 [H]
EC number: NA
Molecular weight: Translated: 27145; Mature: 27145
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKSSNLKATQAALAKAVRLGHADPLNGYAPQRLAVYARLVRNNTFGFIDRCFVEAPNH CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC LSATRWAETKERFIQEGKATSPYFQDIAGEFLTFCQTQTDFSADILALMDFEYTQLLAEV CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EKTNLADPIAWDERTEMQLSPTAFLKSYDVDFLSSHFSQLEKAASHIIVWRNRHFQVKQQ HHHCCCCCCCCCCCCCCEECHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHH KLSELDFWLLTYLAEQPTSLSHLSQALADLIADHASLQPILAQAWTNWFEADVICPVTD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC >Mature Secondary Structure MQPKSSNLKATQAALAKAVRLGHADPLNGYAPQRLAVYARLVRNNTFGFIDRCFVEAPNH CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC LSATRWAETKERFIQEGKATSPYFQDIAGEFLTFCQTQTDFSADILALMDFEYTQLLAEV CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EKTNLADPIAWDERTEMQLSPTAFLKSYDVDFLSSHFSQLEKAASHIIVWRNRHFQVKQQ HHHCCCCCCCCCCCCCCEECHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHH KLSELDFWLLTYLAEQPTSLSHLSQALADLIADHASLQPILAQAWTNWFEADVICPVTD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]