Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15602076
Identifier: 15602076
GI number: 15602076
Start: 236132
End: 237055
Strand: Reverse
Name: 15602076
Synonym: PM0211
Alternate gene names: NA
Gene position: 237055-236132 (Counterclockwise)
Preceding gene: 15602077
Following gene: 15602075
Centisome position: 10.5
GC content: 41.02
Gene sequence:
>924_bases ATGATGTTACAAGGTGCAGGCTTAGGGTATCGTCGTGATCTCGCTGAAGATTTTTTATTACTGCCCGACAACAGTGTTGT CAACTTTATGGAAGTGGCGCCAGAAAATTGGATCAAAATGGGAGGGGCGGCGCGCTATAAATTTGATCAAGCGGCAGAAC GATTTCCACTCGCCGTCCATGGACTTTCACTCTCTTTAGGTGGACAGGCGCCTTTAGATAAAGCCTTATTACAGGGCATT AAAGCATTAATGACACAATATCAAGCTGTCTTTTTTTCTGAGCATTTAAGCTATTGTGAATGTGACGGACATCTTTATGA TTTGCTCCCGATGCCATTTACGGAAGAAGCCGTAAAACATGTGGCACAGCGTATTCGTGAAGTACAAGATTTTCTGGGTA TGCAAATTTCCTTAGAAAATACGTCCTATTATTTGCATTCACCAACCAGTACCATGAACGAAGTCGAATTTCTAAATGCC ATCGCCCAAGAGGCTAACTGTGGTATTCACTTAGATGTCAATAATATTTATGTGAATGGTGTGAACCATGGCTTGCTCAA TCCTTATGTTTTTTTAGATCATGTTGATGTTAGCCGTGTAAACTATATTCATATTGCAGGACACGATGAGGAACATGGCG CCGCAAATCCGATTTCCCCTTCTGATGAAGCCTTTAATAAAATAAAAGGAGAATATCGTCATCTCCCCCAATTATTAGTG GACACACATGGTGAGGCGGTAAAAAGTAATGTCTGGGATTTATTAGAATATGCTTATCAACGTTTACCGCATATTCCACC AACATTACTTGAACGTGATTTTAATTTCCCTCCGTTTGCCGAGCTTTATGCTGAAGTCGAACATATTGCGCAACTGCAAC AAAAACATGCTAAACTGACAGTGGAAAATCGCCATGCAGCCTAA
Upstream 100 bases:
>100_bases GAAGGTAAATGTGGCGAAGGAAAATGCGGTTCTAAATAAAGCACAACGATTGCTGGTGTAATATTTACACCAGCGCTTTA ATTAAAATAATGGAGTCAAT
Downstream 100 bases:
>100_bases ATCATCGAATCTTAAAGCAACCCAAGCTGCTCTAGCTAAAGCCGTACGTCTAGGACATGCTGATCCCTTAAATGGTTATG CACCACAGCGTTTAGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MMLQGAGLGYRRDLAEDFLLLPDNSVVNFMEVAPENWIKMGGAARYKFDQAAERFPLAVHGLSLSLGGQAPLDKALLQGI KALMTQYQAVFFSEHLSYCECDGHLYDLLPMPFTEEAVKHVAQRIREVQDFLGMQISLENTSYYLHSPTSTMNEVEFLNA IAQEANCGIHLDVNNIYVNGVNHGLLNPYVFLDHVDVSRVNYIHIAGHDEEHGAANPISPSDEAFNKIKGEYRHLPQLLV DTHGEAVKSNVWDLLEYAYQRLPHIPPTLLERDFNFPPFAELYAEVEHIAQLQQKHAKLTVENRHAA
Sequences:
>Translated_307_residues MMLQGAGLGYRRDLAEDFLLLPDNSVVNFMEVAPENWIKMGGAARYKFDQAAERFPLAVHGLSLSLGGQAPLDKALLQGI KALMTQYQAVFFSEHLSYCECDGHLYDLLPMPFTEEAVKHVAQRIREVQDFLGMQISLENTSYYLHSPTSTMNEVEFLNA IAQEANCGIHLDVNNIYVNGVNHGLLNPYVFLDHVDVSRVNYIHIAGHDEEHGAANPISPSDEAFNKIKGEYRHLPQLLV DTHGEAVKSNVWDLLEYAYQRLPHIPPTLLERDFNFPPFAELYAEVEHIAQLQQKHAKLTVENRHAA >Mature_307_residues MMLQGAGLGYRRDLAEDFLLLPDNSVVNFMEVAPENWIKMGGAARYKFDQAAERFPLAVHGLSLSLGGQAPLDKALLQGI KALMTQYQAVFFSEHLSYCECDGHLYDLLPMPFTEEAVKHVAQRIREVQDFLGMQISLENTSYYLHSPTSTMNEVEFLNA IAQEANCGIHLDVNNIYVNGVNHGLLNPYVFLDHVDVSRVNYIHIAGHDEEHGAANPISPSDEAFNKIKGEYRHLPQLLV DTHGEAVKSNVWDLLEYAYQRLPHIPPTLLERDFNFPPFAELYAEVEHIAQLQQKHAKLTVENRHAA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y211_PASMU (Q9CP49)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245148.1 - ProteinModelPortal: Q9CP49 - SMR: Q9CP49 - GeneID: 1243558 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0211 - NMPDR: fig|272843.1.peg.211 - HOGENOM: HBG306331 - OMA: IYVNSIN - ProtClustDB: PRK05409 - BioCyc: PMUL272843:PM0211-MONOMER - HAMAP: MF_00697 - InterPro: IPR007801 - InterPro: IPR013022 - Gene3D: G3DSA:3.20.20.150
Pfam domain/function: PF05114 DUF692; SSF51658 Xyl_isomerase-like_TIM-brl
EC number: NA
Molecular weight: Translated: 34665; Mature: 34665
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLQGAGLGYRRDLAEDFLLLPDNSVVNFMEVAPENWIKMGGAARYKFDQAAERFPLAVH CEECCCCCCHHHHHHHCEEECCCCCHHHHHHHCCHHHHHCCCCCCCCHHHHHHHCCEEEE GLSLSLGGQAPLDKALLQGIKALMTQYQAVFFSEHLSYCECDGHLYDLLPMPFTEEAVKH CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCCCCHHHHHH VAQRIREVQDFLGMQISLENTSYYLHSPTSTMNEVEFLNAIAQEANCGIHLDVNNIYVNG HHHHHHHHHHHHCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECEEEEEC VNHGLLNPYVFLDHVDVSRVNYIHIAGHDEEHGAANPISPSDEAFNKIKGEYRHLPQLLV CCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DTHGEAVKSNVWDLLEYAYQRLPHIPPTLLERDFNFPPFAELYAEVEHIAQLQQKHAKLT HCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCEE VENRHAA ECCCCCC >Mature Secondary Structure MMLQGAGLGYRRDLAEDFLLLPDNSVVNFMEVAPENWIKMGGAARYKFDQAAERFPLAVH CEECCCCCCHHHHHHHCEEECCCCCHHHHHHHCCHHHHHCCCCCCCCHHHHHHHCCEEEE GLSLSLGGQAPLDKALLQGIKALMTQYQAVFFSEHLSYCECDGHLYDLLPMPFTEEAVKH CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCCCCHHHHHH VAQRIREVQDFLGMQISLENTSYYLHSPTSTMNEVEFLNAIAQEANCGIHLDVNNIYVNG HHHHHHHHHHHHCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECEEEEEC VNHGLLNPYVFLDHVDVSRVNYIHIAGHDEEHGAANPISPSDEAFNKIKGEYRHLPQLLV CCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DTHGEAVKSNVWDLLEYAYQRLPHIPPTLLERDFNFPPFAELYAEVEHIAQLQQKHAKLT HCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCEE VENRHAA ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100