Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is yjgA [C]
Identifier: 15601984
GI number: 15601984
Start: 145376
End: 145918
Strand: Reverse
Name: yjgA [C]
Synonym: PM0119
Alternate gene names: 15601984
Gene position: 145918-145376 (Counterclockwise)
Preceding gene: 15601992
Following gene: 15601977
Centisome position: 6.46
GC content: 39.41
Gene sequence:
>543_bases ATGGCAAAACGCGGCAAAAATAAAATTGAGTGGGACAATACTGACTGGGAACAAGAAGAAGAGGAAATCATTTGGGTCAG TAAAAGCGAAATTAAGCGCGATGCCGAAGCATTAAAAAAACTCGGTGAGAAACTGGTTGACCTCACCAAAGCAAAATTAG AAAAGATTCCGCTTGAAGAGAAGTTACTTGAGGCAATTGAACTTGCACAACGTTTACAAAAAGAAGCAAGACGTCGCCAA TTACAATATATCGGCAAATTACTTCGCAATATCGATGTTGAGCCGATCCAAGATGCCTTAGAAAAACTGGAAAATAAACA TCAACAGCAACAAGCGATGTTACATAAGCTCGAAATGTTACGTGATACCTTGATTGACAACCCTGAGGCAATCACGCAAT TTCTTGAACAACATCCCGATGCGGATCGCCAACATTTACGTAATCTAGTTCGGGCAGCACAAAAAGAAAAAGCACAAAAT AAACCGCCTAAAGCTTACCGTGAAATTTTCCAATACTTAAAAGACTTCATGCTTGAAGACTAA
Upstream 100 bases:
>100_bases TTGCATATTGATTCCTTCAAACAAATTTTGGGCATTTTATCCTATTTTAGATTTTCATGCTAAAATGTTCGCTTGTTTTT ATGAGATGAAAGGAAAGAGT
Downstream 100 bases:
>100_bases TCTCCTCCACATGAAAAAAGGCGTGAGTTGAAACTCACGCCTTTTTCTTTGCTCGCTTATTTCGTCGGTGCTTGCATGAA ACGGAAGAAATCACTGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAKRGKNKIEWDNTDWEQEEEEIIWVSKSEIKRDAEALKKLGEKLVDLTKAKLEKIPLEEKLLEAIELAQRLQKEARRRQ LQYIGKLLRNIDVEPIQDALEKLENKHQQQQAMLHKLEMLRDTLIDNPEAITQFLEQHPDADRQHLRNLVRAAQKEKAQN KPPKAYREIFQYLKDFMLED
Sequences:
>Translated_180_residues MAKRGKNKIEWDNTDWEQEEEEIIWVSKSEIKRDAEALKKLGEKLVDLTKAKLEKIPLEEKLLEAIELAQRLQKEARRRQ LQYIGKLLRNIDVEPIQDALEKLENKHQQQQAMLHKLEMLRDTLIDNPEAITQFLEQHPDADRQHLRNLVRAAQKEKAQN KPPKAYREIFQYLKDFMLED >Mature_179_residues AKRGKNKIEWDNTDWEQEEEEIIWVSKSEIKRDAEALKKLGEKLVDLTKAKLEKIPLEEKLLEAIELAQRLQKEARRRQL QYIGKLLRNIDVEPIQDALEKLENKHQQQQAMLHKLEMLRDTLIDNPEAITQFLEQHPDADRQHLRNLVRAAQKEKAQNK PPKAYREIFQYLKDFMLED
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family
Homologues:
Organism=Escherichia coli, GI1790681, Length=153, Percent_Identity=62.7450980392157, Blast_Score=181, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y119_PASMU (Q9CPC8)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245056.1 - ProteinModelPortal: Q9CPC8 - SMR: Q9CPC8 - GeneID: 1243466 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0119 - NMPDR: fig|272843.1.peg.119 - HOGENOM: HBG677712 - OMA: KAPWEEE - ProtClustDB: PRK05255 - BioCyc: PMUL272843:PM0119-MONOMER - HAMAP: MF_00765 - InterPro: IPR023153 - InterPro: IPR006839 - PIRSF: PIRSF016183
Pfam domain/function: PF04751 DUF615
EC number: NA
Molecular weight: Translated: 21473; Mature: 21342
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRGKNKIEWDNTDWEQEEEEIIWVSKSEIKRDAEALKKLGEKLVDLTKAKLEKIPLEE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KLLEAIELAQRLQKEARRRQLQYIGKLLRNIDVEPIQDALEKLENKHQQQQAMLHKLEML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RDTLIDNPEAITQFLEQHPDADRQHLRNLVRAAQKEKAQNKPPKAYREIFQYLKDFMLED HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKRGKNKIEWDNTDWEQEEEEIIWVSKSEIKRDAEALKKLGEKLVDLTKAKLEKIPLEE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KLLEAIELAQRLQKEARRRQLQYIGKLLRNIDVEPIQDALEKLENKHQQQQAMLHKLEML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RDTLIDNPEAITQFLEQHPDADRQHLRNLVRAAQKEKAQNKPPKAYREIFQYLKDFMLED HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100