Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15601974
Identifier: 15601974
GI number: 15601974
Start: 134225
End: 134836
Strand: Reverse
Name: 15601974
Synonym: PM0109
Alternate gene names: NA
Gene position: 134836-134225 (Counterclockwise)
Preceding gene: 15601975
Following gene: 15601973
Centisome position: 5.97
GC content: 29.08
Gene sequence:
>612_bases ATGTCACATAATGAATTAAATCTTGCATTGCTAGATGTAAGAAAGGCATACCGTTTATTAGCCGATTATCAGCAGAGAGT CATAGAATTACTAGATTTTATAAAAAATGAACTAAATGCAGAGCATTATTATCACTATATGGATCGATATGATAGCCGTT CAGTTTATAAAATCTATACAGACCAAGAGGCAGGGCTTAAATTATTACCTATGAGAGACATGAATCTATTATGGCACAGA ACTAGAAATATTCCTGATGGAGAATATTGGCAAAATAATATTTCAAAAGATGATTTGGTCTTTGATGTTAATATTGTAAG TGATGAAGATAGTACATTATCCGTAGAAGAAAGTAATAGTGAATTACACATATATATCTACAGCTGTATTAAATATAAAA GAAATAAAAACTGGTATGAAGATCTATGGTTAAAATTTGATTATCCTGAATTCAATCAAGTGAGTATCTTTGAAGATGAG AAACTTGGTATTAAATATCAAGTCTACGGAGAAAAACTGAATCTTGCTGATTTATATGATAAAGAATCTGTTAAAAACAT ACTTCATGGTTTAAAAGATAGAGCATCTAAAGCCTTGAACCAAAAAATATAA
Upstream 100 bases:
>100_bases ATAAGCATTCCAATAAAAATAAGAATAGAAAAAAAATGGATAGAATTAAAAAAAATGAATATTTCAAAAACACATTTCCC TTCATTTTTAGGAGAATAAA
Downstream 100 bases:
>100_bases TTTTTAATTATTTTGAAATGCACAATCCCCATATTTACCTCGGTACTGGCGGTTATAGCGATACAGATTTAATCGGGACG CTGTACCCTTTTGGCACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSHNELNLALLDVRKAYRLLADYQQRVIELLDFIKNELNAEHYYHYMDRYDSRSVYKIYTDQEAGLKLLPMRDMNLLWHR TRNIPDGEYWQNNISKDDLVFDVNIVSDEDSTLSVEESNSELHIYIYSCIKYKRNKNWYEDLWLKFDYPEFNQVSIFEDE KLGIKYQVYGEKLNLADLYDKESVKNILHGLKDRASKALNQKI
Sequences:
>Translated_203_residues MSHNELNLALLDVRKAYRLLADYQQRVIELLDFIKNELNAEHYYHYMDRYDSRSVYKIYTDQEAGLKLLPMRDMNLLWHR TRNIPDGEYWQNNISKDDLVFDVNIVSDEDSTLSVEESNSELHIYIYSCIKYKRNKNWYEDLWLKFDYPEFNQVSIFEDE KLGIKYQVYGEKLNLADLYDKESVKNILHGLKDRASKALNQKI >Mature_202_residues SHNELNLALLDVRKAYRLLADYQQRVIELLDFIKNELNAEHYYHYMDRYDSRSVYKIYTDQEAGLKLLPMRDMNLLWHRT RNIPDGEYWQNNISKDDLVFDVNIVSDEDSTLSVEESNSELHIYIYSCIKYKRNKNWYEDLWLKFDYPEFNQVSIFEDEK LGIKYQVYGEKLNLADLYDKESVKNILHGLKDRASKALNQKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y109_PASMU (Q9CPD8)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245046.1 - GeneID: 1243456 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0109 - NMPDR: fig|272843.1.peg.109 - OMA: WHRTRNI - ProtClustDB: CLSK789324 - BioCyc: PMUL272843:PM0109-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24425; Mature: 24294
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHNELNLALLDVRKAYRLLADYQQRVIELLDFIKNELNAEHYYHYMDRYDSRSVYKIYT CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEE DQEAGLKLLPMRDMNLLWHRTRNIPDGEYWQNNISKDDLVFDVNIVSDEDSTLSVEESNS CCCCCEEEECCCCHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEECCCCCEEEEECCCC ELHIYIYSCIKYKRNKNWYEDLWLKFDYPEFNQVSIFEDEKLGIKYQVYGEKLNLADLYD EEEEEEEEEHHHHCCCCHHHHEEEEECCCCCCCEEEEECCCCCEEEEEECCEECHHHHHC KESVKNILHGLKDRASKALNQKI HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHNELNLALLDVRKAYRLLADYQQRVIELLDFIKNELNAEHYYHYMDRYDSRSVYKIYT CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEE DQEAGLKLLPMRDMNLLWHRTRNIPDGEYWQNNISKDDLVFDVNIVSDEDSTLSVEESNS CCCCCEEEECCCCHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEECCCCCEEEEECCCC ELHIYIYSCIKYKRNKNWYEDLWLKFDYPEFNQVSIFEDEKLGIKYQVYGEKLNLADLYD EEEEEEEEEHHHHCCCCHHHHEEEEECCCCCCCEEEEECCCCCEEEEEECCEECHHHHHC KESVKNILHGLKDRASKALNQKI HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100