Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15601975
Identifier: 15601975
GI number: 15601975
Start: 134838
End: 135608
Strand: Reverse
Name: 15601975
Synonym: PM0110
Alternate gene names: NA
Gene position: 135608-134838 (Counterclockwise)
Preceding gene: 15601976
Following gene: 15601974
Centisome position: 6.01
GC content: 27.63
Gene sequence:
>771_bases ATGCTATCAGCAATTTTACACGGAAAAAAAACTGGCTCTGGACTTGCAGGTCGTCAATTTAAGATAGGGGAAACTCAAGG AGCTGAAGATCTATTAACTGCCACAATATTTGAACGTATCAGCTATTTACCTAATAATACATTTCAAGAAGTTATAAAGA AATTATTCGATGATAAAGAAGATATTGGGAATTTACAAAATATTGAATATTGGCCTAAATGGATGAATAAAAATAGGTTT ATTGAGCCAGATGTTGTTTTAACTGGAACAAATGGAAAGAATATTATTATTGAAGCTAAACGATATGATAATACTCAACA ACAATATGCTATCCAACTAGCTAATGAAATAATGTCCTATTATGATTCAACAGGCCTAAGCAATCCTATATTACTAGCTA TTGGTGGGATGGATAGTTATGATAAAAAAAGAGTAGAAAAAATAAAAAAAGAAATAAAGAATATTTTAATACAAAATAGT TTTAATAGGGAGTTTACACTATATTGTATAAGTTGGAAAAAATTATATCAAATACTCGAATCATCCATACATCAATCAGA AATATTCCTTCAAAGAATTTTAAGTGATATCAGGGAAGCTTATATATGGCATGGTGTACGTTATAAATCTATCCAATGGC TAAAAAGTTTAAAAAGGAACGATATTATTCATATAAGCATTCCAATAAAAATAAGAATAGAAAAAAAATGGATAGAATTA AAAAAAATGAATATTTCAAAAACACATTTCCCTTCATTTTTAGGAGAATAA
Upstream 100 bases:
>100_bases TGACGAAGATTAAGTGTTAGACTACGCAGATACGCAGAGAAGACTATGTTGAAATGGTTGAGTGTGGTGATGAAGCAATA ATAAATTCAAGGACATATAA
Downstream 100 bases:
>100_bases AATGTCACATAATGAATTAAATCTTGCATTGCTAGATGTAAGAAAGGCATACCGTTTATTAGCCGATTATCAGCAGAGAG TCATAGAATTACTAGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLSAILHGKKTGSGLAGRQFKIGETQGAEDLLTATIFERISYLPNNTFQEVIKKLFDDKEDIGNLQNIEYWPKWMNKNRF IEPDVVLTGTNGKNIIIEAKRYDNTQQQYAIQLANEIMSYYDSTGLSNPILLAIGGMDSYDKKRVEKIKKEIKNILIQNS FNREFTLYCISWKKLYQILESSIHQSEIFLQRILSDIREAYIWHGVRYKSIQWLKSLKRNDIIHISIPIKIRIEKKWIEL KKMNISKTHFPSFLGE
Sequences:
>Translated_256_residues MLSAILHGKKTGSGLAGRQFKIGETQGAEDLLTATIFERISYLPNNTFQEVIKKLFDDKEDIGNLQNIEYWPKWMNKNRF IEPDVVLTGTNGKNIIIEAKRYDNTQQQYAIQLANEIMSYYDSTGLSNPILLAIGGMDSYDKKRVEKIKKEIKNILIQNS FNREFTLYCISWKKLYQILESSIHQSEIFLQRILSDIREAYIWHGVRYKSIQWLKSLKRNDIIHISIPIKIRIEKKWIEL KKMNISKTHFPSFLGE >Mature_256_residues MLSAILHGKKTGSGLAGRQFKIGETQGAEDLLTATIFERISYLPNNTFQEVIKKLFDDKEDIGNLQNIEYWPKWMNKNRF IEPDVVLTGTNGKNIIIEAKRYDNTQQQYAIQLANEIMSYYDSTGLSNPILLAIGGMDSYDKKRVEKIKKEIKNILIQNS FNREFTLYCISWKKLYQILESSIHQSEIFLQRILSDIREAYIWHGVRYKSIQWLKSLKRNDIIHISIPIKIRIEKKWIEL KKMNISKTHFPSFLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y110_PASMU (Q9CPD7)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245047.1 - GeneID: 1243457 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0110 - NMPDR: fig|272843.1.peg.110 - HOGENOM: HBG643657 - OMA: TATIFER - ProtClustDB: CLSK789325 - BioCyc: PMUL272843:PM0110-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29980; Mature: 29980
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSAILHGKKTGSGLAGRQFKIGETQGAEDLLTATIFERISYLPNNTFQEVIKKLFDDKE CCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHH DIGNLQNIEYWPKWMNKNRFIEPDVVLTGTNGKNIIIEAKRYDNTQQQYAIQLANEIMSY HHCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH YDSTGLSNPILLAIGGMDSYDKKRVEKIKKEIKNILIQNSFNREFTLYCISWKKLYQILE HHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHH SSIHQSEIFLQRILSDIREAYIWHGVRYKSIQWLKSLKRNDIIHISIPIKIRIEKKWIEL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEHHHHHH KKMNISKTHFPSFLGE HHCCCCHHHCCHHHCC >Mature Secondary Structure MLSAILHGKKTGSGLAGRQFKIGETQGAEDLLTATIFERISYLPNNTFQEVIKKLFDDKE CCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHH DIGNLQNIEYWPKWMNKNRFIEPDVVLTGTNGKNIIIEAKRYDNTQQQYAIQLANEIMSY HHCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH YDSTGLSNPILLAIGGMDSYDKKRVEKIKKEIKNILIQNSFNREFTLYCISWKKLYQILE HHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHH SSIHQSEIFLQRILSDIREAYIWHGVRYKSIQWLKSLKRNDIIHISIPIKIRIEKKWIEL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEHHHHHH KKMNISKTHFPSFLGE HHCCCCHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100