Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ytdD
Identifier: 15673848
GI number: 15673848
Start: 1936094
End: 1936369
Strand: Reverse
Name: ytdD
Synonym: L119456
Alternate gene names: NA
Gene position: 1936369-1936094 (Counterclockwise)
Preceding gene: 15673849
Following gene: 15673847
Centisome position: 81.86
GC content: 27.17
Gene sequence:
>276_bases ATGCTTATTACACTTACAATAATAAATTGGCTTTTACGCTTACTTGATGTTTATTCAATTATTCTAGTTATTTACGCCTT AATGAGTTGGATACCAACTCTTTATGGAACTTGGTTTGGACGTATAATTGTTAAAGTTTCTCGTCCCTACTTAAGTTTAT TTGAAAATTTACCTCTACAATTTTGGGGATTAGATTTTTCAATCGTTATTGCTTTTATTGTTTTGAAATTTATTCAAAGA TTTATTGTTATTGTATTTAACGGAGTATTCTATTGA
Upstream 100 bases:
>100_bases GTCAAATTTTCTTGATGACTCCAGCAAATATCACAGTCGATGCAGCGAAAGAAATGTCTATCTTAGCTGGTCAAAATTTT GAAAGTTACGATATTTACTA
Downstream 100 bases:
>100_bases TTACTGAAAATATCTATCAACACTTTCAAGAAAAGGAACGGCATTTTATTGATCGTTGTTTAGAATGGATAAATCGAGTA GAAGAATCTTATTCGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MLITLTIINWLLRLLDVYSIILVIYALMSWIPTLYGTWFGRIIVKVSRPYLSLFENLPLQFWGLDFSIVIAFIVLKFIQR FIVIVFNGVFY
Sequences:
>Translated_91_residues MLITLTIINWLLRLLDVYSIILVIYALMSWIPTLYGTWFGRIIVKVSRPYLSLFENLPLQFWGLDFSIVIAFIVLKFIQR FIVIVFNGVFY >Mature_91_residues MLITLTIINWLLRLLDVYSIILVIYALMSWIPTLYGTWFGRIIVKVSRPYLSLFENLPLQFWGLDFSIVIAFIVLKFIQR FIVIVFNGVFY
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10793; Mature: 10793
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITLTIINWLLRLLDVYSIILVIYALMSWIPTLYGTWFGRIIVKVSRPYLSLFENLPLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FWGLDFSIVIAFIVLKFIQRFIVIVFNGVFY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLITLTIINWLLRLLDVYSIILVIYALMSWIPTLYGTWFGRIIVKVSRPYLSLFENLPLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FWGLDFSIVIAFIVLKFIQRFIVIVFNGVFY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA