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The map label for this gene is ytcD

Identifier: 15673840

GI number: 15673840

Start: 1927107

End: 1927538

Strand: Reverse

Name: ytcD

Synonym: L110467

Alternate gene names: NA

Gene position: 1927538-1927107 (Counterclockwise)

Preceding gene: 15673843

Following gene: 15673838

Centisome position: 81.48

GC content: 32.41

Gene sequence:

>432_bases
ATGGTGGAAGAATATAAAAATATCTTAGTTGCAGTAGATGGTTCAGAACAAGCTTATGATGCCCTTCGTGAAGCGGTTGA
CACAGCAAAATTAAATCATTCACATCTGAAAATATTGTATGTTTTAAATGATAAGTTAGCAAATATTCCAGTGCATTTAG
ACACAATGACTTTGTATAAAAGTGTACAAGAGCATTCTGATTATGTTGTAGAGCAAGTTCAAGAATATCTTAAAGGCACA
GAAGTTGATTTTGAGATTGTACGTTTAACTGGCAGCCCTAAAAGAGAAATTATTAATTATGCAAACGAAAATAATATCGA
TTTAGTTGTAATTGGGTCAACTGGTCTTGATGCGATTGATCGTTTTATCATTGGTTCAACAACACAGTATATTGTTAACC
ATGCCTCTTGCAACGTAATGGTTATTAAATAA

Upstream 100 bases:

>100_bases
TTCTTTAAATATCTTATAATCTTATTCAGATCAATTAATGTGATTTATTGATGGTATATTTCTAATAATAATTATATAAT
ATTCTTAGGGAGGTTTTATT

Downstream 100 bases:

>100_bases
AGAAAAGAAAAAGTCATCAATTGAGATGACTTTTATTTTATAAATTAATATATCAAAAATAAAAATACCAACTTAGTGTT
GGTATTTTTCAATTGCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MVEEYKNILVAVDGSEQAYDALREAVDTAKLNHSHLKILYVLNDKLANIPVHLDTMTLYKSVQEHSDYVVEQVQEYLKGT
EVDFEIVRLTGSPKREIINYANENNIDLVVIGSTGLDAIDRFIIGSTTQYIVNHASCNVMVIK

Sequences:

>Translated_143_residues
MVEEYKNILVAVDGSEQAYDALREAVDTAKLNHSHLKILYVLNDKLANIPVHLDTMTLYKSVQEHSDYVVEQVQEYLKGT
EVDFEIVRLTGSPKREIINYANENNIDLVVIGSTGLDAIDRFIIGSTTQYIVNHASCNVMVIK
>Mature_143_residues
MVEEYKNILVAVDGSEQAYDALREAVDTAKLNHSHLKILYVLNDKLANIPVHLDTMTLYKSVQEHSDYVVEQVQEYLKGT
EVDFEIVRLTGSPKREIINYANENNIDLVVIGSTGLDAIDRFIIGSTTQYIVNHASCNVMVIK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16113; Mature: 16113

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEEYKNILVAVDGSEQAYDALREAVDTAKLNHSHLKILYVLNDKLANIPVHLDTMTLYK
CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEHHHHHHH
SVQEHSDYVVEQVQEYLKGTEVDFEIVRLTGSPKREIINYANENNIDLVVIGSTGLDAID
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEECCCCHHHHH
RFIIGSTTQYIVNHASCNVMVIK
HHHCCCCHHHEEECCCCEEEEEC
>Mature Secondary Structure
MVEEYKNILVAVDGSEQAYDALREAVDTAKLNHSHLKILYVLNDKLANIPVHLDTMTLYK
CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEHHHHHHH
SVQEHSDYVVEQVQEYLKGTEVDFEIVRLTGSPKREIINYANENNIDLVVIGSTGLDAID
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEECCCCHHHHH
RFIIGSTTQYIVNHASCNVMVIK
HHHCCCCHHHEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA