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The map label for this gene is oppA

Identifier: 15673819

GI number: 15673819

Start: 1905092

End: 1906894

Strand: Reverse

Name: oppA

Synonym: L88446

Alternate gene names: 15673819

Gene position: 1906894-1905092 (Counterclockwise)

Preceding gene: 15673820

Following gene: 15673818

Centisome position: 80.61

GC content: 38.16

Gene sequence:

>1803_bases
ATGAAAAAATTAAAAGTAACTTTATTGGCAAGTAGTGTAGTTTTAGCAGCTGCACTCCTAAGTGCTTGTGGCTCTAACCA
GAACTCAAGTACAAGTACCAAAAAATTAAAAGCGGGGAATTTTGATGTTGCTTATCAAAATCCGGACAAGGCAATCAAAG
GTGGGAATTTAAAGATTGCTTATCAAAGTGACTCACCGATGAAAGCTGAATGGTTGGCTCCACTTTCAGATGATGCTACC
TTTGGTTCTATGTCTAGCCCTGGTGGTGGGCAAGATGGTCTCTTCTTTACCAACAGTTCATTTAAATATATCAATGGTGG
GCCTGCTAATGTAAGTCTTTACAAAGATGCAAAAACAGCAACGATTACCTTGCGTAAAGATTTGAAATGGTCTGATGGAT
CAGAAGTGACAGCTAAAGACTATGAGTTCAGTTATGATCTTACCGCTAATCCTGCTTATGGTTCCGACCGTTGGACTGAT
TCTCTGGCAAATATTGTTGGCTTGAGTGATTATCATGCGGGTAAAGCTAAAACAATCTCAGGGATTACTTTCCCAGACGG
TGAAAACGGAAAAGTCATCAAGGTTCAATTTAAAGAAATGACGCCTGGAATGAATCAAACAGGAAATGGTTATTTTCTTG
AAACTGTAGCTCCTTATCAATATTTGAAAGATGTTGCCCCTAAAGATTTGGCTTCTAGTCCAAAATCGACAACAAAACCT
TTGGTTACAGGCCCTTTTAAACCGGAAAATGTGGTTGCTGGTGAATCTATTAAGTATGTCCCAAATCCTTACTATTGGGG
TGAAAAACCAAAATTAAATTCAATTACTTATGAAATTGTATCAACCGCTAAATCAGTCGCGGCTCTTTCTGCTCACAAAT
ATGATTATATCAATGATATGCGCGCAAGCCAGTATAAACAGGTGAAAGATGTCAAAGGCTATAAAGTTTTGGGTCAACAA
GAATTATATATTAGTTTGATGTATTATAATCTTGGTCACTATGATGTGAAAAAGTCAATTAGTGTTCAAGACCGCAAAAC
ACCTTTGCAAGATCAAAATGTTCGTGAAGCCCTTGGTTATGCTCGAAATGTCGCAGCAGTTCAAGCAAAATTCTCTAATG
GACTTGCCACACCTGCTAATGGATTGATTCCACCAATCTTCAAAGAATTTACTAGCCCGTCAGTTAAAGGTTATGAAAAA
CAAGATCTTGATAAAGCGAATAAACTTTTAGATGAAGACGGTTGGAAACTCAATAAATCTACAGGCTATCGTGAAAAAGA
TGGAAAAGAATTATCGCTTGTTTATGCAGCTCGTGTAGGTGATGCAAACTCCGAAACCATTGCCCAAAACTACATCCAAC
AATGGAAGAAAATTGGTGTGAAAGTTAGTCTTTATCATGGAAAACTGATGGAATTTAATTCTTGGGTTGACCATATGACG
ACTCCTCCAGGATCAGACGATTGGGATATCACTGACGGTGCATGGTCACTCTCAGGAGAACCTTCTCAACAAGACTTGTT
CTCAGCAGCGGCACCTTATAACTTTGGTCACTTTAATGACCCTGAAATTACAAAAGATTTGAATGATATTGATTCAACCA
AAGCTGAGGATTCAACTTATCGTAAGGCTGCTTTTATTAAATATCAAGAAGATATGAATAAAAAGGCTTATGTTGTTCCA
ACGGCTTATGCTATCAACTACACCCCAGTTAACAAACGTGTGGTAGGGATGACGCTTGACTATGGTGCAATGAATACTTG
GTCAGAAATTGGTGTTTCATCTGATAAGATGGCAACCAAATAG

Upstream 100 bases:

>100_bases
CATTCAAGAGTGATAAAAATGTTTATCTATTAAAAATGGATATGATAAATTAAATATTATATTGAAGTAAGAACTAAAAA
GAAATTATTGGAGAATTAAG

Downstream 100 bases:

>100_bases
TTTTATTTAACTTTTGTTTACAAGTTTTTTTGTAAAAATACCCTTACTTTAGTTTTCGCAATTCTAAAGTCAAAGAAGCT
CAAATTTATGATTTGAGCTT

Product: oligopeptide ABC trasporter substrate binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MKKLKVTLLASSVVLAAALLSACGSNQNSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKIAYQSDSPMKAEWLAPLSDDAT
FGSMSSPGGGQDGLFFTNSSFKYINGGPANVSLYKDAKTATITLRKDLKWSDGSEVTAKDYEFSYDLTANPAYGSDRWTD
SLANIVGLSDYHAGKAKTISGITFPDGENGKVIKVQFKEMTPGMNQTGNGYFLETVAPYQYLKDVAPKDLASSPKSTTKP
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEIVSTAKSVAALSAHKYDYINDMRASQYKQVKDVKGYKVLGQQ
ELYISLMYYNLGHYDVKKSISVQDRKTPLQDQNVREALGYARNVAAVQAKFSNGLATPANGLIPPIFKEFTSPSVKGYEK
QDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVYAARVGDANSETIAQNYIQQWKKIGVKVSLYHGKLMEFNSWVDHMT
TPPGSDDWDITDGAWSLSGEPSQQDLFSAAAPYNFGHFNDPEITKDLNDIDSTKAEDSTYRKAAFIKYQEDMNKKAYVVP
TAYAINYTPVNKRVVGMTLDYGAMNTWSEIGVSSDKMATK

Sequences:

>Translated_600_residues
MKKLKVTLLASSVVLAAALLSACGSNQNSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKIAYQSDSPMKAEWLAPLSDDAT
FGSMSSPGGGQDGLFFTNSSFKYINGGPANVSLYKDAKTATITLRKDLKWSDGSEVTAKDYEFSYDLTANPAYGSDRWTD
SLANIVGLSDYHAGKAKTISGITFPDGENGKVIKVQFKEMTPGMNQTGNGYFLETVAPYQYLKDVAPKDLASSPKSTTKP
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEIVSTAKSVAALSAHKYDYINDMRASQYKQVKDVKGYKVLGQQ
ELYISLMYYNLGHYDVKKSISVQDRKTPLQDQNVREALGYARNVAAVQAKFSNGLATPANGLIPPIFKEFTSPSVKGYEK
QDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVYAARVGDANSETIAQNYIQQWKKIGVKVSLYHGKLMEFNSWVDHMT
TPPGSDDWDITDGAWSLSGEPSQQDLFSAAAPYNFGHFNDPEITKDLNDIDSTKAEDSTYRKAAFIKYQEDMNKKAYVVP
TAYAINYTPVNKRVVGMTLDYGAMNTWSEIGVSSDKMATK
>Mature_600_residues
MKKLKVTLLASSVVLAAALLSACGSNQNSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKIAYQSDSPMKAEWLAPLSDDAT
FGSMSSPGGGQDGLFFTNSSFKYINGGPANVSLYKDAKTATITLRKDLKWSDGSEVTAKDYEFSYDLTANPAYGSDRWTD
SLANIVGLSDYHAGKAKTISGITFPDGENGKVIKVQFKEMTPGMNQTGNGYFLETVAPYQYLKDVAPKDLASSPKSTTKP
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEIVSTAKSVAALSAHKYDYINDMRASQYKQVKDVKGYKVLGQQ
ELYISLMYYNLGHYDVKKSISVQDRKTPLQDQNVREALGYARNVAAVQAKFSNGLATPANGLIPPIFKEFTSPSVKGYEK
QDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVYAARVGDANSETIAQNYIQQWKKIGVKVSLYHGKLMEFNSWVDHMT
TPPGSDDWDITDGAWSLSGEPSQQDLFSAAAPYNFGHFNDPEITKDLNDIDSTKAEDSTYRKAAFIKYQEDMNKKAYVVP
TAYAINYTPVNKRVVGMTLDYGAMNTWSEIGVSSDKMATK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family

Homologues:

Organism=Escherichia coli, GI1787495, Length=487, Percent_Identity=25.6673511293634, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789966, Length=492, Percent_Identity=25, Blast_Score=76, Evalue=8e-15,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): OPPA1_LACLA (Q9CEK0)

Other databases:

- EMBL:   AE005176
- PIR:   E86854
- RefSeq:   NP_267994.1
- ProteinModelPortal:   Q9CEK0
- GeneID:   1115502
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L88446
- NMPDR:   fig|272623.1.peg.1883
- HOGENOM:   HBG703471
- OMA:   LDEDGWK
- ProtClustDB:   CLSK797239
- BioCyc:   LLAC272623:L88446-MONOMER
- InterPro:   IPR000914

Pfam domain/function: PF00496 SBP_bac_5

EC number: NA

Molecular weight: Translated: 66046; Mature: 66046

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS01040 SBP_BACTERIAL_5; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKVTLLASSVVLAAALLSACGSNQNSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKIA
CCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCEEEEEECCCHHCCCCCEEEE
YQSDSPMKAEWLAPLSDDATFGSMSSPGGGQDGLFFTNSSFKYINGGPANVSLYKDAKTA
ECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEEECCCEE
TITLRKDLKWSDGSEVTAKDYEFSYDLTANPAYGSDRWTDSLANIVGLSDYHAGKAKTIS
EEEEEECCCCCCCCCEEECCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEE
GITFPDGENGKVIKVQFKEMTPGMNQTGNGYFLETVAPYQYLKDVAPKDLASSPKSTTKP
CEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHHCCCCCCCCC
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEIVSTAKSVAALSAHKYDYINDM
EEECCCCCCCEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RASQYKQVKDVKGYKVLGQQELYISLMYYNLGHYDVKKSISVQDRKTPLQDQNVREALGY
HHHHHHHHHHCCCEEEECCCEEEEEEEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHH
ARNVAAVQAKFSNGLATPANGLIPPIFKEFTSPSVKGYEKQDLDKANKLLDEDGWKLNKS
HHHHHHEEEHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEECCC
TGYREKDGKELSLVYAARVGDANSETIAQNYIQQWKKIGVKVSLYHGKLMEFNSWVDHMT
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCC
TPPGSDDWDITDGAWSLSGEPSQQDLFSAAAPYNFGHFNDPEITKDLNDIDSTKAEDSTY
CCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH
RKAAFIKYQEDMNKKAYVVPTAYAINYTPVNKRVVGMTLDYGAMNTWSEIGVSSDKMATK
HHHEEEEEHHCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKLKVTLLASSVVLAAALLSACGSNQNSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKIA
CCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCEEEEEECCCHHCCCCCEEEE
YQSDSPMKAEWLAPLSDDATFGSMSSPGGGQDGLFFTNSSFKYINGGPANVSLYKDAKTA
ECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEEECCCEE
TITLRKDLKWSDGSEVTAKDYEFSYDLTANPAYGSDRWTDSLANIVGLSDYHAGKAKTIS
EEEEEECCCCCCCCCEEECCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEE
GITFPDGENGKVIKVQFKEMTPGMNQTGNGYFLETVAPYQYLKDVAPKDLASSPKSTTKP
CEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHHCCCCCCCCC
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEIVSTAKSVAALSAHKYDYINDM
EEECCCCCCCEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RASQYKQVKDVKGYKVLGQQELYISLMYYNLGHYDVKKSISVQDRKTPLQDQNVREALGY
HHHHHHHHHHCCCEEEECCCEEEEEEEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHH
ARNVAAVQAKFSNGLATPANGLIPPIFKEFTSPSVKGYEKQDLDKANKLLDEDGWKLNKS
HHHHHHEEEHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEECCC
TGYREKDGKELSLVYAARVGDANSETIAQNYIQQWKKIGVKVSLYHGKLMEFNSWVDHMT
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCC
TPPGSDDWDITDGAWSLSGEPSQQDLFSAAAPYNFGHFNDPEITKDLNDIDSTKAEDSTY
CCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH
RKAAFIKYQEDMNKKAYVVPTAYAINYTPVNKRVVGMTLDYGAMNTWSEIGVSSDKMATK
HHHEEEEEHHCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11337471