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The map label for this gene is oppC

Identifier: 15673820

GI number: 15673820

Start: 1906999

End: 1907883

Strand: Reverse

Name: oppC

Synonym: L90358

Alternate gene names: 15673820

Gene position: 1907883-1906999 (Counterclockwise)

Preceding gene: 15673821

Following gene: 15673819

Centisome position: 80.65

GC content: 37.06

Gene sequence:

>885_bases
ATGACAGAAAAAAAACACAAAAATTCTTTATCATTAGTTCACTCAATCAAAGAAGAACTAAAAAAAGATAAATTAGCGAT
GATTTCAACAATTTTTCTAGTTGCTGTCTTTCTAATCGTTTATATTTACTCGATGTTTTTAAAACAATCAAATTATGTTG
ATGTGAATATCATGGACCAATATCTGGCACCGCTGACGAATGGACATTTACTGGGAACTGATAATGGTGGACGAGATATT
ATCATGATGTTAATGATTTCTGCACGAAACTCTTTCAATATCGCTTTTGCAGTTACACTCATTACTTTAGTTGTAGGAAA
TATCTTAGGGGTAATTACGGGCTACTTTGGCGGAAGGTTTGATTTAATCTTCATGCGTTTCACTGATTTTGTCATGATTT
TACCATCAATGATGATCATTATTGTTTTTGTAACTATCATCCCACGGTTTAATTCTTGGTCTTTGATTGGGATTATCAGT
ATCTTTAGTTGGATAGGGACAACGCGTCTGATTCGGGCAAGAACAATGACGGAAGTCAATCGAGATTATGTTCGAGCATC
AAAAACTTCGGGAACCTCTGATTTTAAAATTATGTTTCGGGAAATATGGCCCAACTTGTCCACCTTAGTCATTGCTGAAG
CAACGCTTGTTTTTGCTGGAAATATTGGTTTAGAAACAGGGCTTTCTTTCTTAGGTTTTGGACTTCCAGCAGGGACACCA
TCTTTGGGGACAATGATAAATGAAGCGACTAATCCAGAGACAATGACTGATAAGCCTTGGACTTGGGTTCCAGCAACAGT
GGTCATCCTAATTGTGGTGCTTGCCATTATCTTTATCGGAAATGCGCTAAGACGAGTGGCTGACCAAAGACAAGCTACAA
GATAA

Upstream 100 bases:

>100_bases
GATTTTATTAAATGGTTTTTTGGGACTTCTTGGAGCCCTCCTGTCGGATATTATCATGGCAATGGTTGACCCACGAATTC
GGATTCAATAAGGAGTGAAA

Downstream 100 bases:

>100_bases
ACAACATTCAAGAGTGATAAAAATGTTTATCTATTAAAAATGGATATGATAAATTAAATATTATATTGAAGTAAGAACTA
AAAAGAAATTATTGGAGAAT

Product: oligopeptide ABC transporter permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTEKKHKNSLSLVHSIKEELKKDKLAMISTIFLVAVFLIVYIYSMFLKQSNYVDVNIMDQYLAPLTNGHLLGTDNGGRDI
IMMLMISARNSFNIAFAVTLITLVVGNILGVITGYFGGRFDLIFMRFTDFVMILPSMMIIIVFVTIIPRFNSWSLIGIIS
IFSWIGTTRLIRARTMTEVNRDYVRASKTSGTSDFKIMFREIWPNLSTLVIAEATLVFAGNIGLETGLSFLGFGLPAGTP
SLGTMINEATNPETMTDKPWTWVPATVVILIVVLAIIFIGNALRRVADQRQATR

Sequences:

>Translated_294_residues
MTEKKHKNSLSLVHSIKEELKKDKLAMISTIFLVAVFLIVYIYSMFLKQSNYVDVNIMDQYLAPLTNGHLLGTDNGGRDI
IMMLMISARNSFNIAFAVTLITLVVGNILGVITGYFGGRFDLIFMRFTDFVMILPSMMIIIVFVTIIPRFNSWSLIGIIS
IFSWIGTTRLIRARTMTEVNRDYVRASKTSGTSDFKIMFREIWPNLSTLVIAEATLVFAGNIGLETGLSFLGFGLPAGTP
SLGTMINEATNPETMTDKPWTWVPATVVILIVVLAIIFIGNALRRVADQRQATR
>Mature_293_residues
TEKKHKNSLSLVHSIKEELKKDKLAMISTIFLVAVFLIVYIYSMFLKQSNYVDVNIMDQYLAPLTNGHLLGTDNGGRDII
MMLMISARNSFNIAFAVTLITLVVGNILGVITGYFGGRFDLIFMRFTDFVMILPSMMIIIVFVTIIPRFNSWSLIGIISI
FSWIGTTRLIRARTMTEVNRDYVRASKTSGTSDFKIMFREIWPNLSTLVIAEATLVFAGNIGLETGLSFLGFGLPAGTPS
LGTMINEATNPETMTDKPWTWVPATVVILIVVLAIIFIGNALRRVADQRQATR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1788505, Length=232, Percent_Identity=31.4655172413793, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1787498, Length=291, Percent_Identity=29.2096219931272, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789964, Length=263, Percent_Identity=35.361216730038, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787054, Length=284, Percent_Identity=26.4084507042254, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787760, Length=277, Percent_Identity=25.6317689530686, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=28.3333333333333, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787549, Length=219, Percent_Identity=26.9406392694064, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OPPC_LACLA (P0A4N9)

Other databases:

- EMBL:   L18760
- EMBL:   AE005176
- PIR:   D53290
- RefSeq:   NP_267995.1
- RefSeq:   YP_001174732.1
- ProteinModelPortal:   P0A4N9
- GeneID:   1115503
- GeneID:   5077311
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L90358
- NMPDR:   fig|272623.1.peg.1884
- HOGENOM:   HBG729429
- OMA:   EMHILES
- ProtClustDB:   CLSK2750138
- BioCyc:   LLAC272623:L90358-MONOMER
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 32835; Mature: 32704

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf3685ec)-; HASH(0xfb63cf4)-; HASH(0xfba4730)-; HASH(0xfb503a8)-; HASH(0xb8e4848)-; HASH(0xf6b09a0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKKHKNSLSLVHSIKEELKKDKLAMISTIFLVAVFLIVYIYSMFLKQSNYVDVNIMDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH
YLAPLTNGHLLGTDNGGRDIIMMLMISARNSFNIAFAVTLITLVVGNILGVITGYFGGRF
HHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DLIFMRFTDFVMILPSMMIIIVFVTIIPRFNSWSLIGIISIFSWIGTTRLIRARTMTEVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYVRASKTSGTSDFKIMFREIWPNLSTLVIAEATLVFAGNIGLETGLSFLGFGLPAGTP
HHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCC
SLGTMINEATNPETMTDKPWTWVPATVVILIVVLAIIFIGNALRRVADQRQATR
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
TEKKHKNSLSLVHSIKEELKKDKLAMISTIFLVAVFLIVYIYSMFLKQSNYVDVNIMDQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH
YLAPLTNGHLLGTDNGGRDIIMMLMISARNSFNIAFAVTLITLVVGNILGVITGYFGGRF
HHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DLIFMRFTDFVMILPSMMIIIVFVTIIPRFNSWSLIGIISIFSWIGTTRLIRARTMTEVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYVRASKTSGTSDFKIMFREIWPNLSTLVIAEATLVFAGNIGLETGLSFLGFGLPAGTP
HHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCC
SLGTMINEATNPETMTDKPWTWVPATVVILIVVLAIIFIGNALRRVADQRQATR
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244921; 11337471