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The map label for this gene is ysiD

Identifier: 15673799

GI number: 15673799

Start: 1884712

End: 1885293

Strand: Reverse

Name: ysiD

Synonym: L68066

Alternate gene names: NA

Gene position: 1885293-1884712 (Counterclockwise)

Preceding gene: 15673800

Following gene: 15673797

Centisome position: 79.7

GC content: 35.4

Gene sequence:

>582_bases
ATGGATAAATTTAAGGAAATTTTTGAAGCGATTAAAGCTGACCCACAGAACAAAAAATATACAAAAGATGGGATAGAGCC
TCTTTATTCTGTCCATAAAGAAGCAAAGATTTGTATTATTGGTCAGGCGCCAGGCATTCGAGCACAAGAATCAAGACTCT
TTTGGAATGATCCGTCAGGGGACCGCCTGCGTGATTGGCTTGGAATTGACCGAACCACTTTTTATGAGTCAAATAAAATA
TCTATTTTGCCTTTAGATTTTTATTTTCCTGGAAAAGGAAAATCAGGTGATCTTCCACCTCGGGCAGGTTTTGCTCAAAA
ATGGCATAAAGCACTTTTAGAAGAAATGCCTGAGATTGAACTTTTTATTCTAGTAGGTTCTTATGCCATAAAGTATTATT
TAAATTTAAAATCATCAGCAAAAACAACAGAAGTGATTCATGATTTTGAAGCCTACTTACCAAAATATTTTCCGATTGTT
CATCCCAGCCCACGAAATAATATGTGGTTAGCCAAAAATCCGTGGTTTGAGCCTGAACTTTTACCAGAACTAAAAAAAAG
AGTTGCTCAATTAATGAAATAA

Upstream 100 bases:

>100_bases
GATTTATCTTAGAAATATTTATCAGATAAGCTTTCTGTCAGTAAATTTTACAATAAAAAGCGTAATCTATAAACTTAGAT
TACGCTTTTGAGGAAAGAAA

Downstream 100 bases:

>100_bases
GCTACTGACAAGAATAAATAACGATAAAAAGTTACTAACAAGACTGTTAATAACTTTTTTCATGGCTTGGCCTTCAATTA
ATGAATTGTTCTTTCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MDKFKEIFEAIKADPQNKKYTKDGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKI
SILPLDFYFPGKGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIHDFEAYLPKYFPIV
HPSPRNNMWLAKNPWFEPELLPELKKRVAQLMK

Sequences:

>Translated_193_residues
MDKFKEIFEAIKADPQNKKYTKDGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKI
SILPLDFYFPGKGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIHDFEAYLPKYFPIV
HPSPRNNMWLAKNPWFEPELLPELKKRVAQLMK
>Mature_193_residues
MDKFKEIFEAIKADPQNKKYTKDGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSGDRLRDWLGIDRTTFYESNKI
SILPLDFYFPGKGKSGDLPPRAGFAQKWHKALLEEMPEIELFILVGSYAIKYYLNLKSSAKTTEVIHDFEAYLPKYFPIV
HPSPRNNMWLAKNPWFEPELLPELKKRVAQLMK

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22449; Mature: 22449

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFKEIFEAIKADPQNKKYTKDGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSG
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCC
DRLRDWLGIDRTTFYESNKISILPLDFYFPGKGKSGDLPPRAGFAQKWHKALLEEMPEIE
HHHHHHHCCCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
LFILVGSYAIKYYLNLKSSAKTTEVIHDFEAYLPKYFPIVHPSPRNNMWLAKNPWFEPEL
EEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHH
LPELKKRVAQLMK
HHHHHHHHHHHCC
>Mature Secondary Structure
MDKFKEIFEAIKADPQNKKYTKDGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSG
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCC
DRLRDWLGIDRTTFYESNKISILPLDFYFPGKGKSGDLPPRAGFAQKWHKALLEEMPEIE
HHHHHHHCCCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
LFILVGSYAIKYYLNLKSSAKTTEVIHDFEAYLPKYFPIVHPSPRNNMWLAKNPWFEPEL
EEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHH
LPELKKRVAQLMK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]