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The map label for this gene is ysiB

Identifier: 15673797

GI number: 15673797

Start: 1882927

End: 1884042

Strand: Reverse

Name: ysiB

Synonym: L66281

Alternate gene names: 15673797

Gene position: 1884042-1882927 (Counterclockwise)

Preceding gene: 15673799

Following gene: 15673796

Centisome position: 79.64

GC content: 32.97

Gene sequence:

>1116_bases
ATGTTCAAAAATAGTAAATTATTCTTCTGGACAGTGGAAATATTAGCCGTTACTTTGTTAATCTTTCTCTTGTCTCAGAT
TGATTTTGTATTTCAACCCATTAAAACATTGTTGACACTCTTATTTGTCCCATTTATTATTGCAGGTTTTTTATATTATG
TTTTTAATCCTGTTGTTACTTTCATGGAAGAGAAGTTAAGAATAAAAAAGGTATTAGGAATTTTTATTGTTCTTTTATTA
ATCTTAGGAATGATTATTTTTGCAATTGCCTCAGTCATTCCAAGCTTAATTTCACAGTTGACAAGTCTAATTAATGCAAC
TGGGAAAGCTTATCCACAAGTTAGGGCTTGGATTGAAGGGCTTCAACATAATCCACGATTCGCTCAAATCTACGACCAAC
TTGATGTTAATAGTCTTGTTGAGAAATTAAATCTTTCGTATACTGATATTTTGCACAATTTGCTTAATAGTATCACGGTT
AGTGTTGGAAGTATCGTTGGTATCATTACAAGCATTGTTATGGTAATGATTTTGGTACCAATCTTACTTTACTATATGCT
TAAAGATGGTGAAAAGATTATTCCGTTTTTGAAGGAAAATGTTTTGACCGAAGATAGATTGAATATCTTTGAACTTCTTG
AAAATATGAATCATACGATTTCACGTTATATTTCAGGAGTTGCGCTTGATGCCTTGCTTGTCTTTATTGTCGTCTTTATT
GGTTACATGGTTCTTGGAATTCCTTATGCCTTTCTTTTCGCACTCTTTGCTGGAGTAACAAATCTCATTCCTTATGCGGG
TCCATATATTGGTGTTTTACCGATGATAGTAACGGTGGCCTTTAATCGACCAGTAACAGCACTTATTGCCGTTATCTATG
TCCTTGTTTTGCAACAGCTTGATGGTAATCTGGTTTATCCTAAAATTGTGGGGTCAGCTGTTAAAGTTCATCCAGTAACC
GTTATGATTCTCATGTTAATTTCTGGAAGTTTGTATGGAATTCTAGGAATGATTATCGCTGTTCCTGCTTATTGCTTAGT
CAAAGAGATTGTTAAATTTGCCAATAGCCTTTATAATAATCATAAAGCCGAACAAAGAAAAATTATTTCAAAATGA

Upstream 100 bases:

>100_bases
TATAAATAGTCTAAAAATAGCAGAAATAAGTTATTTAAAATAACAATTATTCAATCATTTATTTTAAGAAAGACAAAAAT
ATATTAAATAAAGGAAATTT

Downstream 100 bases:

>100_bases
GAACAAAAATATGATATAATAATTCTATCTAAATTGTTAACTCTCATTTTCAGTAAATTTGAGTTGGCAAAGTTTTGAGT
GTTAAAATAAACACTATAAT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MFKNSKLFFWTVEILAVTLLIFLLSQIDFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLRIKKVLGIFIVLLL
ILGMIIFAIASVIPSLISQLTSLINATGKAYPQVRAWIEGLQHNPRFAQIYDQLDVNSLVEKLNLSYTDILHNLLNSITV
SVGSIVGIITSIVMVMILVPILLYYMLKDGEKIIPFLKENVLTEDRLNIFELLENMNHTISRYISGVALDALLVFIVVFI
GYMVLGIPYAFLFALFAGVTNLIPYAGPYIGVLPMIVTVAFNRPVTALIAVIYVLVLQQLDGNLVYPKIVGSAVKVHPVT
VMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNNHKAEQRKIISK

Sequences:

>Translated_371_residues
MFKNSKLFFWTVEILAVTLLIFLLSQIDFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLRIKKVLGIFIVLLL
ILGMIIFAIASVIPSLISQLTSLINATGKAYPQVRAWIEGLQHNPRFAQIYDQLDVNSLVEKLNLSYTDILHNLLNSITV
SVGSIVGIITSIVMVMILVPILLYYMLKDGEKIIPFLKENVLTEDRLNIFELLENMNHTISRYISGVALDALLVFIVVFI
GYMVLGIPYAFLFALFAGVTNLIPYAGPYIGVLPMIVTVAFNRPVTALIAVIYVLVLQQLDGNLVYPKIVGSAVKVHPVT
VMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNNHKAEQRKIISK
>Mature_371_residues
MFKNSKLFFWTVEILAVTLLIFLLSQIDFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLRIKKVLGIFIVLLL
ILGMIIFAIASVIPSLISQLTSLINATGKAYPQVRAWIEGLQHNPRFAQIYDQLDVNSLVEKLNLSYTDILHNLLNSITV
SVGSIVGIITSIVMVMILVPILLYYMLKDGEKIIPFLKENVLTEDRLNIFELLENMNHTISRYISGVALDALLVFIVVFI
GYMVLGIPYAFLFALFAGVTNLIPYAGPYIGVLPMIVTVAFNRPVTALIAVIYVLVLQQLDGNLVYPKIVGSAVKVHPVT
VMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNNHKAEQRKIISK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=352, Percent_Identity=24.7159090909091, Blast_Score=111, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41525; Mature: 41525

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNSKLFFWTVEILAVTLLIFLLSQIDFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMEEKLRIKKVLGIFIVLLLILGMIIFAIASVIPSLISQLTSLINATGKAYPQVRAWIEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LQHNPRFAQIYDQLDVNSLVEKLNLSYTDILHNLLNSITVSVGSIVGIITSIVMVMILVP
HCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLYYMLKDGEKIIPFLKENVLTEDRLNIFELLENMNHTISRYISGVALDALLVFIVVFI
HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYMVLGIPYAFLFALFAGVTNLIPYAGPYIGVLPMIVTVAFNRPVTALIAVIYVLVLQQL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DGNLVYPKIVGSAVKVHPVTVMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNN
CCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HKAEQRKIISK
CHHHHHHHCCC
>Mature Secondary Structure
MFKNSKLFFWTVEILAVTLLIFLLSQIDFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMEEKLRIKKVLGIFIVLLLILGMIIFAIASVIPSLISQLTSLINATGKAYPQVRAWIEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LQHNPRFAQIYDQLDVNSLVEKLNLSYTDILHNLLNSITVSVGSIVGIITSIVMVMILVP
HCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLYYMLKDGEKIIPFLKENVLTEDRLNIFELLENMNHTISRYISGVALDALLVFIVVFI
HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYMVLGIPYAFLFALFAGVTNLIPYAGPYIGVLPMIVTVAFNRPVTALIAVIYVLVLQQL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DGNLVYPKIVGSAVKVHPVTVMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNN
CCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HKAEQRKIISK
CHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]