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The map label for this gene is ysfB

Identifier: 15673775

GI number: 15673775

Start: 1851452

End: 1852222

Strand: Reverse

Name: ysfB

Synonym: L34806

Alternate gene names: 15673775

Gene position: 1852222-1851452 (Counterclockwise)

Preceding gene: 15673776

Following gene: 15673774

Centisome position: 78.3

GC content: 37.09

Gene sequence:

>771_bases
ATGGCTACACTTGAAATTAAAAATCTTCATGTGGCGATTGAAGATAAAGAGATTCTCAAAGGGGTCAATCTAGTCATCAA
CACCAATGAAATCCATGCGATTATGGGACCTAATGGGACTGGTAAATCAACATTATCTGCTGCAATTATGGGAAATCCTA
ATTATAGCGTGACACAAGGAGAAGTTCTTTTTGACGGTCAAAACGTTTTAGAAATGAGCGTTGATGAAAGAGCTCGTCTT
GGACTTTTCCTTGCCATGCAATATCCATCTGAAATTCCAGGAATTACGAATGCAGAATTTTTGCGAGCAGCAATGAATGC
TAAACGTGCTGAGGATGACAAAGTTTCTGTTATGGAATTTATCAAAAAATTGGATAAAAATATGGAAGTTTTGAGCATGA
AAGAAGAAATGGCTGAGCGCTATCTCAATGAAGGCTTTTCTGGTGGTGAAAAGAAACGTAATGAAATCCTTCAACTTTTG
ATGTTAGAACCAACTTTTGCCATTCTTGATGAAATTGACTCAGGACTTGATATTGATGCTTTAAAAGTTGTTGCTAAAGG
TGTTAATTCAATGCGTGGTGAGAAATTTGGGGCATTGATTATTACCCACTATCAACGTTTGCTTGATTATATTACACCAG
ATGTTGTCCACATTATGATGGATGGTCGTGTGGTGAAAACAGGTGGCGCAGAACTAGCTAAACGTCTAGAAACTGAAGGA
TATGTCAATATCGCTGAGGAACTTGGATTAGAATATAAAGAAGAAGTTTAA

Upstream 100 bases:

>100_bases
ATAAAAATAATGTATGCGAAAATAACAAATTTTGTCAATTTTTTGTTAGAATAGAGACTATAAATGTCAAATACAATTGA
CAATTCAAAGGAGCGAAAAA

Downstream 100 bases:

>100_bases
GGAAAGGAGATAGTAAGTTATTTTTGCTTACTGACAGAGCTGTCAGTAAGTCTAAAATTCATTAATTTAGTGACAGAATG
TTTTGTCAGCAAATTAATGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYSVTQGEVLFDGQNVLEMSVDERARL
GLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEFIKKLDKNMEVLSMKEEMAERYLNEGFSGGEKKRNEILQLL
MLEPTFAILDEIDSGLDIDALKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEG
YVNIAEELGLEYKEEV

Sequences:

>Translated_256_residues
MATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYSVTQGEVLFDGQNVLEMSVDERARL
GLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEFIKKLDKNMEVLSMKEEMAERYLNEGFSGGEKKRNEILQLL
MLEPTFAILDEIDSGLDIDALKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEG
YVNIAEELGLEYKEEV
>Mature_255_residues
ATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYSVTQGEVLFDGQNVLEMSVDERARLG
LFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEFIKKLDKNMEVLSMKEEMAERYLNEGFSGGEKKRNEILQLLM
LEPTFAILDEIDSGLDIDALKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEGY
VNIAEELGLEYKEEV

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI148612844, Length=231, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI255708477, Length=231, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI42741659, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI9961252, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI4505771, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787972, Length=246, Percent_Identity=52.4390243902439, Blast_Score=266, Evalue=1e-72,
Organism=Escherichia coli, GI1789593, Length=206, Percent_Identity=27.6699029126214, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788761, Length=204, Percent_Identity=25.4901960784314, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788225, Length=239, Percent_Identity=26.3598326359833, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787500, Length=243, Percent_Identity=30.4526748971193, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790162, Length=213, Percent_Identity=25.3521126760563, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787029, Length=231, Percent_Identity=26.4069264069264, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=26.457399103139, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786698, Length=201, Percent_Identity=27.363184079602, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788506, Length=223, Percent_Identity=23.7668161434978, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=242, Percent_Identity=28.099173553719, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=228, Percent_Identity=27.6315789473684, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=232, Percent_Identity=27.1551724137931, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=224, Percent_Identity=25.8928571428571, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=241, Percent_Identity=27.3858921161826, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=233, Percent_Identity=25.7510729613734, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=221, Percent_Identity=27.1493212669683, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=197, Percent_Identity=27.9187817258883, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363262, Length=220, Percent_Identity=29.5454545454545, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21357907, Length=220, Percent_Identity=26.3636363636364, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24653245, Length=220, Percent_Identity=29.5454545454545, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641342, Length=259, Percent_Identity=24.3243243243243, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28425; Mature: 28294

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYSVTQG
CCEEEEEEEEEEECCHHHHCCCEEEEECCCEEEEECCCCCCCHHEEEEEECCCCCCEECC
EVLFDGQNVLEMSVDERARLGLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEF
EEEECCCCCEEECCCHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
IKKLDKNMEVLSMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFAILDEIDSGLDIDA
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
LKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHEEHEECCEEEECCHHHHHHHHCCCC
YVNIAEELGLEYKEEV
CEEEHHHCCCCHHCCC
>Mature Secondary Structure 
ATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYSVTQG
CEEEEEEEEEEECCHHHHCCCEEEEECCCEEEEECCCCCCCHHEEEEEECCCCCCEECC
EVLFDGQNVLEMSVDERARLGLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEF
EEEECCCCCEEECCCHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
IKKLDKNMEVLSMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFAILDEIDSGLDIDA
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
LKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHEEHEECCEEEECCHHHHHHHHCCCC
YVNIAEELGLEYKEEV
CEEEHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]