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The map label for this gene is ysfA

Identifier: 15673774

GI number: 15673774

Start: 1850058

End: 1851314

Strand: Reverse

Name: ysfA

Synonym: L33412

Alternate gene names: 15673774

Gene position: 1851314-1850058 (Counterclockwise)

Preceding gene: 15673775

Following gene: 15673773

Centisome position: 78.26

GC content: 36.99

Gene sequence:

>1257_bases
ATGAATCAAGAAATCTTAAACTTTTCACAAATGCATGCTGAACCAGCTTGGTTATCAGATTTACGTCAAAAAGCTGCACT
TGAATTTGAAAATCTAGAATTACCTAATATTGAACGAGTAAAAATTAATCGTTGGGGCTTAGACCATTTAAGCATTTCTG
AAAACGAAGAAATTGGATCTGTTCCTACTTTTACGGAAATTCCAAATCATCCTTTGCTTGTTCAAGTCGGAAGTCAAACA
GTTATGGAACAAATGACACCAAATTTGGCTGAACAAGGCGTAATTTTCACAGATTTCAATTCAGCTTTAACCGAAATTCC
TGAACTACTTGAGGAAAATTTTGGTTCTGTGGTTCCATTTAATGAAAGTCGTTTAACAGCAGCAAATACTGTGACATTTA
ATTCTGGATTAGTTCTTTATGTTCCAGATGGTGTGGAAGTACTTGAACCCATTGAATCAATTTTGATGCAAGAGGGTTCA
TCAGAAGTTCCTTTTAATAAACGAATTTTAATTATCGTTGGAAAAAATGCCAAAGTTGACTACCTTGAACGTTTGGAAAC
AAGTGATGAGCAAAGCTCAAAGGCAAAAGCAAATATTGTCGTTGAAGTAATTGCAAAGGCAGGGGCTCAAGTCAAATTTG
CAGCCATTGACCGTTTAGGAGAAAATGTTACAGCTTCAGTTGTTCGTCGCGGATTGATTGGTGATAATGCAACAGTTGAC
TGGTCCGTTGGTGTCATGAATGATGGAAATGTTGTTGCTGACTTTGATAGTGACCTCAAAGGGAATGGTTCTCATTCACA
AATTAAAGTGGTTGGGATTTCAACAGGTCATCAAACGCAAGGAATTGATACAAGAGTGACTAATTTTGGTCTAAATTCGG
TTGGTCATATCTTGCAAAATGGTGTAATTCTTGATAAAGGAACTTTGACATTTAATGCCATTGGTCATATTATCAAAGGG
GCGAAAAATGCGGATGCTCAACAATCTTCTCACGTTTTAATGCTTTCTGATAAAGGACGAGGAGATGCAAATCCAATTCT
CTTGATTGATGAAAATGAAGTAACTGCGGGTCACGCAGCTTCTGTTGGTCAGGTAGATGAGGAAGATTTATTCTATCTTC
AATCTCGTGGACTTGATGAAGAAACTGCTAAACGACTTGTTATTCGAGGATTTCTCGGTTCAGTTGTCAGTGAAATTCCT
GTCAAATCAGTCCAAGCAGAATTTATTGAAACTATTGAAAGAAAGCTGGGCATGTAA

Upstream 100 bases:

>100_bases
AGCTGTCAGTAAGTCTAAAATTCATTAATTTAGTGACAGAATGTTTTGTCAGCAAATTAATGAATTCAGTTAAGAAAATG
CAAACTTGCTAATATTAATT

Downstream 100 bases:

>100_bases
TGCTTGAAGGCATCAAAAAAGATTTTCCAGTATTGAATCAAATTGTTAATGATGAACCTTTGGTCTATTTGGACAATGCG
GCAACTACTCAAAAACCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNQEILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLSISENEEIGSVPTFTEIPNHPLLVQVGSQT
VMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVPFNESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQEGS
SEVPFNKRILIIVGKNAKVDYLERLETSDEQSSKAKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATVD
WSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKG
AKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIP
VKSVQAEFIETIERKLGM

Sequences:

>Translated_418_residues
MNQEILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLSISENEEIGSVPTFTEIPNHPLLVQVGSQT
VMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVPFNESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQEGS
SEVPFNKRILIIVGKNAKVDYLERLETSDEQSSKAKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATVD
WSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKG
AKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIP
VKSVQAEFIETIERKLGM
>Mature_418_residues
MNQEILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLSISENEEIGSVPTFTEIPNHPLLVQVGSQT
VMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVPFNESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQEGS
SEVPFNKRILIIVGKNAKVDYLERLETSDEQSSKAKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATVD
WSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQNGVILDKGTLTFNAIGHIIKG
AKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHAASVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIP
VKSVQAEFIETIERKLGM

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=339, Percent_Identity=26.5486725663717, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787971, Length=171, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 45465; Mature: 45465

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQEILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLSISENEEIGS
CCCHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
VPTFTEIPNHPLLVQVGSQTVMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVPF
CCCHHHCCCCCEEEEECCHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCC
NESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQEGSSEVPFNKRILIIVGKNAKVD
CCCCEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHH
YLERLETSDEQSSKAKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATVD
HHHHHCCCCCHHHHHHHHHHHEEHHHCCCCEEEHHHHHCCCCHHHHHHHHCCCCCCCEEE
WSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQN
EEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHC
GVILDKGTLTFNAIGHIIKGAKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHAA
CEEEECCCEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCC
SVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIPVKSVQAEFIETIERKLGM
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQEILNFSQMHAEPAWLSDLRQKAALEFENLELPNIERVKINRWGLDHLSISENEEIGS
CCCHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
VPTFTEIPNHPLLVQVGSQTVMEQMTPNLAEQGVIFTDFNSALTEIPELLEENFGSVVPF
CCCHHHCCCCCEEEEECCHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCC
NESRLTAANTVTFNSGLVLYVPDGVEVLEPIESILMQEGSSEVPFNKRILIIVGKNAKVD
CCCCEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHH
YLERLETSDEQSSKAKANIVVEVIAKAGAQVKFAAIDRLGENVTASVVRRGLIGDNATVD
HHHHHCCCCCHHHHHHHHHHHEEHHHCCCCEEEHHHHHCCCCHHHHHHHHCCCCCCCEEE
WSVGVMNDGNVVADFDSDLKGNGSHSQIKVVGISTGHQTQGIDTRVTNFGLNSVGHILQN
EEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHC
GVILDKGTLTFNAIGHIIKGAKNADAQQSSHVLMLSDKGRGDANPILLIDENEVTAGHAA
CEEEECCCEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCC
SVGQVDEEDLFYLQSRGLDEETAKRLVIRGFLGSVVSEIPVKSVQAEFIETIERKLGM
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]