Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is tenA
Identifier: 15673761
GI number: 15673761
Start: 1838686
End: 1839342
Strand: Reverse
Name: tenA
Synonym: L0228
Alternate gene names: 15673761
Gene position: 1839342-1838686 (Counterclockwise)
Preceding gene: 30024054
Following gene: 15673760
Centisome position: 77.75
GC content: 35.62
Gene sequence:
>657_bases ATGTTATTTACTGAATTAGCAAGAGAAAAATCATCAATATTTTGGGAAAGAAGTTTTGAGCATCCTTTTATTCAAGGATT AGTGAGTGGAGAATTAGCTCCTGAGGTTTTTCGCTATTATTTGTTGCAAGACCGTTATTATCTTGAACATTTTAGTAAGT TATATTTTCTTATTGCCAAGAAATCTGCTAGTGAAGAGATTCAAGCACATTTAAGATTAAATGCCGAAGAACTAAAAAAT GGAGAGATTTTTGTTCGCGAGGGATTTTTTAAAGAATTAGAGATTGGTGAACAAGAAATTTTAGAAACGCCGGTTGCTCC CACTGCTTATCATTATGTTTCTCATATGTATCGTCAGCTTATTGATGGCTCTGTCAATAGTGCAATTGCGGGAATGTTGC CTTGTGCTTGGCTATATCATGAAATTGGTTTACGATTAATTGAGGTGGGGTCGCCCAATCCTTTGTATCAAAAATGGATT GAAACCTATGCGAGTGAAGAAGCTACCGTCCAAATCGCAAAAGAGTGTGATATTATTAATCGGCTTTATCAAGAAAGTGA TGAACAAGAGCAAGAACAGATGCTTGAGGCTTTTTTGATTAGTAGTAAAATGGAGGCTGATTTTTGGGAAATGGCTTTGG TCTTAGAAAAATGGTAG
Upstream 100 bases:
>100_bases TCAAGTGCAGCTCCGCTTTTAATCCAAATTGTCATCGACATTGGCAAGTTTATTTTAATGAATAGGCATATGTTTTTAAT ATTATGAAGGAAGAAATGAA
Downstream 100 bases:
>100_bases TTGAAATTTTTCTGTAAAAGTTAAAAAGTCTTATATGACTTCTAATATAAAAAAAGATTAAATCTATATCAGTTAATTCT TGCAAACGGATACACAAAAT
Product: TenA
Products: NA
Alternate protein names: Thiaminase II; Transcriptional activator tenA [H]
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKSASEEIQAHLRLNAEELKN GEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPLYQKWI ETYASEEATVQIAKECDIINRLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLEKW
Sequences:
>Translated_218_residues MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKSASEEIQAHLRLNAEELKN GEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPLYQKWI ETYASEEATVQIAKECDIINRLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLEKW >Mature_218_residues MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAKKSASEEIQAHLRLNAEELKN GEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQLIDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPLYQKWI ETYASEEATVQIAKECDIINRLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLEKW
Specific function: Stimulates the production of several extracellular degradative enzymes at the transcriptional level, probably by interfering with degS and degU, which are required for this effect. Is not an essential protein, but affects the sporulation frequency [H]
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiaminase-2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: =3.5.99.2 [H]
Molecular weight: Translated: 25609; Mature: 25609
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAK CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC KSASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQL CCHHHHHHHHHCCCHHHCCCCCEEEECCCHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHH IDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPLYQKWIETYASEEATVQIAKECDIIN HCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH RLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLEKW HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MLFTELAREKSSIFWERSFEHPFIQGLVSGELAPEVFRYYLLQDRYYLEHFSKLYFLIAK CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC KSASEEIQAHLRLNAEELKNGEIFVREGFFKELEIGEQEILETPVAPTAYHYVSHMYRQL CCHHHHHHHHHCCCHHHCCCCCEEEECCCHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHH IDGSVNSAIAGMLPCAWLYHEIGLRLIEVGSPNPLYQKWIETYASEEATVQIAKECDIIN HCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH RLYQESDEQEQEQMLEAFLISSKMEADFWEMALVLEKW HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1898926; 9384377 [H]