Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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Identifier: 30024054
GI number: 30024054
Start: 1839378
End: 1839683
Strand: Reverse
Name: Not Available
Synonym: L200067
Alternate gene names: NA
Gene position: 1839683-1839378 (Counterclockwise)
Preceding gene: 15673762
Following gene: 15673761
Centisome position: 77.77
GC content: 34.64
Gene sequence:
>306_bases TTGCGAGAAAAAATCTGGGGGAAAGTGATAGATGAGGAAGGCAGGTGTACTCATTATCATCAAGAAAATGATATTGTCGC CCTAAAATGTTCAGACTGTGAAAAGTATTTTTCTTGTTATCATTGTCACGATGAATTAGAGAATCATTTATTTAGGGCTA CTGATAAAGAAGACTTTCCAGTACTTTGTGGCCATTGTGGAAAAAAATTAAATTTTAATGATTATTCGCGAGGAGAGTGT ATCAAGTGCAGCTCCGCTTTTAATCCAAATTGTCATCGACATTGGCAAGTTTATTTTAATGAATAG
Upstream 100 bases:
>100_bases GATGACGGAAGCTTGATTTTAAAAGCAAAATCAGGAGAATTACAAACTTTTAAAAGTGGCGAAGTTGTGAAAGTTGATTG GTAATGAAAGGTGAATTTTA
Downstream 100 bases:
>100_bases GCATATGTTTTTAATATTATGAAGGAAGAAATGAAATGTTATTTACTGAATTAGCAAGAGAAAAATCATCAATATTTTGG GAAAGAAGTTTTGAGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: CHY Zinc Finger Protein; Zinc Finger CHY Domain Protein; Zinc Finger Protein; Helper Of Tim Protein; CHY Zinc Finger Family; Zn-Finger Protein; Zinc Finger Domain Containing Protein; Zinc Finger CHY Domain-Containing Protein
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MREKIWGKVIDEEGRCTHYHQENDIVALKCSDCEKYFSCYHCHDELENHLFRATDKEDFPVLCGHCGKKLNFNDYSRGEC IKCSSAFNPNCHRHWQVYFNE
Sequences:
>Translated_101_residues MREKIWGKVIDEEGRCTHYHQENDIVALKCSDCEKYFSCYHCHDELENHLFRATDKEDFPVLCGHCGKKLNFNDYSRGEC IKCSSAFNPNCHRHWQVYFNE >Mature_101_residues MREKIWGKVIDEEGRCTHYHQENDIVALKCSDCEKYFSCYHCHDELENHLFRATDKEDFPVLCGHCGKKLNFNDYSRGEC IKCSSAFNPNCHRHWQVYFNE
Specific function: Unknown
COG id: COG4357
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322766, Length=108, Percent_Identity=34.2592592592593, Blast_Score=78, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12053; Mature: 12053
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 9.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREKIWGKVIDEEGRCTHYHQENDIVALKCSDCEKYFSCYHCHDELENHLFRATDKEDFP CCCCCCCEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCC VLCGHCGKKLNFNDYSRGECIKCSSAFNPNCHRHWQVYFNE EEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECC >Mature Secondary Structure MREKIWGKVIDEEGRCTHYHQENDIVALKCSDCEKYFSCYHCHDELENHLFRATDKEDFP CCCCCCCEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCC VLCGHCGKKLNFNDYSRGECIKCSSAFNPNCHRHWQVYFNE EEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA