Click here to switch to the map view.

The map label for this gene is ysbC

Identifier: 15673737

GI number: 15673737

Start: 1812726

End: 1813649

Strand: Reverse

Name: ysbC

Synonym: L196077

Alternate gene names: NA

Gene position: 1813649-1812726 (Counterclockwise)

Preceding gene: 15673738

Following gene: 15673736

Centisome position: 76.67

GC content: 37.66

Gene sequence:

>924_bases
ATGTATATTTACCTAGCTTTTGCTTTAGTTGGCGGTTTTTTACTTGCTAATCAAAATCCAATCAATGCGGATTTACGAAA
AATTGTTGGCTCACCATTTTTAGCCTCTGGAATTTCCAACTTTGTTGGTTCGATTTTTTTAGGAATCATCACTTTAGTGA
CAAGTCAAACACTTTTTCCTAGTTTTCAATTTGTTGGCTCACACCCAGCATGGATATGGATTGGTGGGGTTCTTGGTGGG
ATTTTCCTAACGTCTAATGTTTTACTTTTTCCAAGATTAGGAGCTGTCCAAACAGTGATTTTACCTATTTTGGGTCAAAT
ATTGATGGGGACACTTATTGATTCATTTGGCTGGTTTCATGCCATGCAACTTCCGATGACTCTGATGCGCTTTTTGGGAA
TTATCATTACTTTAGCTGGTGTTATTGTCGCGGTTGTTCTTCCTAATTTAAAAGAAAAAGAAGCAGAAACGCACCAAACT
AACTTACTAGGCTGGCGGATATGGGCGGTCATCGTTGGGGCAATGTCAGCTGCTCAACAAGCAATTAATGGCCGATTGGG
AGTTTTACTTGAAAATACTGCACAAGCAGCCTTTGTTTCGTTCTTCATTGGATTTTTAGCTATTTTTATCGTGTCTCTTT
TTATTGACCACCGTTTGCCAAAAATTTCAGAATTAAAAAAAGCAAAACCTTGGAATGGAATTGGTGGATTTTTAGGAGCT
TCATTTGTTTTTGCAACAGTCGTTGCTGTTCCGCAAATTGGTGCAGGGCTGACAATTATGATGGGCTTGATTGGACAAAT
TTTAGGCAGTATGTTGGTTCAACAATTTGGTTGGTGGCGCTCAAGTAAATATGGCATTCAAATTTGGCAAATTGTTGGGA
TTCTAATTATGCTGACCGGAATAATATTCATTAAATTTTTATAA

Upstream 100 bases:

>100_bases
TCGGAGAGGAACCCTATCTAAAAATTACAAAAATGTGGTAGCATTAAAAAACTCCCAGCTTTTATAAAAGCTGTAAAAAC
ACTTATTTAAAGGAGAAACG

Downstream 100 bases:

>100_bases
AGTAGCTAGTAATATGGAACAGGGCTTCACGCTCACTGCCTTCCGTCTGCGCGTTCACTAAGCAGTAATACCTATAAAAG
AACTTAGAAAATTGAGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: Orotate Transporter; Glycyl-TRNA Synthetase; Glycyl-TRNA Synthetase Beta Subunit

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MYIYLAFALVGGFLLANQNPINADLRKIVGSPFLASGISNFVGSIFLGIITLVTSQTLFPSFQFVGSHPAWIWIGGVLGG
IFLTSNVLLFPRLGAVQTVILPILGQILMGTLIDSFGWFHAMQLPMTLMRFLGIIITLAGVIVAVVLPNLKEKEAETHQT
NLLGWRIWAVIVGAMSAAQQAINGRLGVLLENTAQAAFVSFFIGFLAIFIVSLFIDHRLPKISELKKAKPWNGIGGFLGA
SFVFATVVAVPQIGAGLTIMMGLIGQILGSMLVQQFGWWRSSKYGIQIWQIVGILIMLTGIIFIKFL

Sequences:

>Translated_307_residues
MYIYLAFALVGGFLLANQNPINADLRKIVGSPFLASGISNFVGSIFLGIITLVTSQTLFPSFQFVGSHPAWIWIGGVLGG
IFLTSNVLLFPRLGAVQTVILPILGQILMGTLIDSFGWFHAMQLPMTLMRFLGIIITLAGVIVAVVLPNLKEKEAETHQT
NLLGWRIWAVIVGAMSAAQQAINGRLGVLLENTAQAAFVSFFIGFLAIFIVSLFIDHRLPKISELKKAKPWNGIGGFLGA
SFVFATVVAVPQIGAGLTIMMGLIGQILGSMLVQQFGWWRSSKYGIQIWQIVGILIMLTGIIFIKFL
>Mature_307_residues
MYIYLAFALVGGFLLANQNPINADLRKIVGSPFLASGISNFVGSIFLGIITLVTSQTLFPSFQFVGSHPAWIWIGGVLGG
IFLTSNVLLFPRLGAVQTVILPILGQILMGTLIDSFGWFHAMQLPMTLMRFLGIIITLAGVIVAVVLPNLKEKEAETHQT
NLLGWRIWAVIVGAMSAAQQAINGRLGVLLENTAQAAFVSFFIGFLAIFIVSLFIDHRLPKISELKKAKPWNGIGGFLGA
SFVFATVVAVPQIGAGLTIMMGLIGQILGSMLVQQFGWWRSSKYGIQIWQIVGILIMLTGIIFIKFL

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33323; Mature: 33323

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIYLAFALVGGFLLANQNPINADLRKIVGSPFLASGISNFVGSIFLGIITLVTSQTLFP
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SFQFVGSHPAWIWIGGVLGGIFLTSNVLLFPRLGAVQTVILPILGQILMGTLIDSFGWFH
CHHHCCCCCHHEEHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMQLPMTLMRFLGIIITLAGVIVAVVLPNLKEKEAETHQTNLLGWRIWAVIVGAMSAAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINGRLGVLLENTAQAAFVSFFIGFLAIFIVSLFIDHRLPKISELKKAKPWNGIGGFLGA
HHCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHH
SFVFATVVAVPQIGAGLTIMMGLIGQILGSMLVQQFGWWRSSKYGIQIWQIVGILIMLTG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
IIFIKFL
HHHHHCC
>Mature Secondary Structure
MYIYLAFALVGGFLLANQNPINADLRKIVGSPFLASGISNFVGSIFLGIITLVTSQTLFP
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SFQFVGSHPAWIWIGGVLGGIFLTSNVLLFPRLGAVQTVILPILGQILMGTLIDSFGWFH
CHHHCCCCCHHEEHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMQLPMTLMRFLGIIITLAGVIVAVVLPNLKEKEAETHQTNLLGWRIWAVIVGAMSAAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINGRLGVLLENTAQAAFVSFFIGFLAIFIVSLFIDHRLPKISELKKAKPWNGIGGFLGA
HHCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHH
SFVFATVVAVPQIGAGLTIMMGLIGQILGSMLVQQFGWWRSSKYGIQIWQIVGILIMLTG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
IIFIKFL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA