Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ysaA
Identifier: 15673730
GI number: 15673730
Start: 1805530
End: 1806594
Strand: Reverse
Name: ysaA
Synonym: L188881
Alternate gene names: NA
Gene position: 1806594-1805530 (Counterclockwise)
Preceding gene: 15673731
Following gene: 15673729
Centisome position: 76.37
GC content: 30.99
Gene sequence:
>1065_bases ATGACGATCTATCTTCATTCAATTCAAATTGGAGTTCTTCTCTTTTTTATATTTTTATTTATATCATTAATTCCATATTT GATTGTACAATATCGTCGGTATGGTCGGATTAATTTTTGGCGCTTTTTTGTCAATTTTTCATTTATTCTTTATCTCATTT GCGCTTATGCCATGACAATTTTCCCGCTTCCTCCTGTGAGTGAAGTAGCAAAAATGACAGGTCCAAAGCAAAACTTAGTT CCATTTGAGTTTGTTCGTCAATTTATTTTATATAGTCCTTTTAATATAAATGAACCTTCAACTTGGCTTGCAGCTCTAAA AGATTCAACATTTATCCAACCATTTTTTAATCTACTTTTAACCTTGCCTTTTGGCCTTTATTTAAGATATTTATTTAAAC GCTCATTTAAACAAACTTTTGTTTTAAGCTTTTTGCTAACTTTATCATTTGAACTTATCCAAAGGTCAGCTCTTTTTGGA CTATATCCTCGACCTTATCGTTTGTTTGATGTTGATGATTTAATGATTAATACGCTTGGAAGTTTAATTGGATTTGGAAT TGCGGTTACTTTTAGTCGATTTTTACCAGATTTGGATGCAACTAAGGCTGAAAGTTCAAGAGTTAGTCTTTCAAGACGTT TCATTGCCTTTTTAGTTGATTTGGTTCTTATTTTTATCATTGGAAGTCTTTTTCTACCAATAGGCTATTATTCAGAATTA ATAATTTTAGGACTTGTCCCGCTAGTTCTCAAAGCAACACCAGGTCAATTATTATTGAGAATTCAAATAAAAGCTAAAAA TCGTTTTAGAATTGCTTTGCGCCAATTTTTATCTTTTGGAAACTTTGCTTTGATTATCTCAGCAGAATATTTTCTTCAAC GTTCAGGTACAATACCTCAGGATCAATTGGGACAAAACTTTTTACTTATTTTACTCTTTTTAGGATTGAGTCTTTTACCT CTACTAGATGTTTTAATTGCTTTTCTCTCGAAAACAAGAAAACTTTGGTATGAAAGAGTGAGTGATACAGAAATGATAGC AAAATTGAAAACAAATGAGGAGTGA
Upstream 100 bases:
>100_bases GCTACTTTTGATATAATAAAAGGAACAAAAACAATGGTTTTCTCGGCACTAAATGTATCTTTTGTTAGAGAAAAATAGTT ACCTTTAGGGAAAGGAAAAT
Downstream 100 bases:
>100_bases ATATGACTAAAATATTTATTGTAGAAGATGATGAAATTATTGTGAAAGCAATTAAGATTGCCTTAGAAAAAGAATTTCAA GTCAGAAGTGTTTCCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycopeptide Antibiotics Resistance Protein; Permease; Integral Membrane Protein; Vanz Family Protein; Carbohydrate Kinase YjeF Related Protein; VanZ-Like Protein; VanZ/RDD Family Protein
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTIYLHSIQIGVLLFFIFLFISLIPYLIVQYRRYGRINFWRFFVNFSFILYLICAYAMTIFPLPPVSEVAKMTGPKQNLV PFEFVRQFILYSPFNINEPSTWLAALKDSTFIQPFFNLLLTLPFGLYLRYLFKRSFKQTFVLSFLLTLSFELIQRSALFG LYPRPYRLFDVDDLMINTLGSLIGFGIAVTFSRFLPDLDATKAESSRVSLSRRFIAFLVDLVLIFIIGSLFLPIGYYSEL IILGLVPLVLKATPGQLLLRIQIKAKNRFRIALRQFLSFGNFALIISAEYFLQRSGTIPQDQLGQNFLLILLFLGLSLLP LLDVLIAFLSKTRKLWYERVSDTEMIAKLKTNEE
Sequences:
>Translated_354_residues MTIYLHSIQIGVLLFFIFLFISLIPYLIVQYRRYGRINFWRFFVNFSFILYLICAYAMTIFPLPPVSEVAKMTGPKQNLV PFEFVRQFILYSPFNINEPSTWLAALKDSTFIQPFFNLLLTLPFGLYLRYLFKRSFKQTFVLSFLLTLSFELIQRSALFG LYPRPYRLFDVDDLMINTLGSLIGFGIAVTFSRFLPDLDATKAESSRVSLSRRFIAFLVDLVLIFIIGSLFLPIGYYSEL IILGLVPLVLKATPGQLLLRIQIKAKNRFRIALRQFLSFGNFALIISAEYFLQRSGTIPQDQLGQNFLLILLFLGLSLLP LLDVLIAFLSKTRKLWYERVSDTEMIAKLKTNEE >Mature_353_residues TIYLHSIQIGVLLFFIFLFISLIPYLIVQYRRYGRINFWRFFVNFSFILYLICAYAMTIFPLPPVSEVAKMTGPKQNLVP FEFVRQFILYSPFNINEPSTWLAALKDSTFIQPFFNLLLTLPFGLYLRYLFKRSFKQTFVLSFLLTLSFELIQRSALFGL YPRPYRLFDVDDLMINTLGSLIGFGIAVTFSRFLPDLDATKAESSRVSLSRRFIAFLVDLVLIFIIGSLFLPIGYYSELI ILGLVPLVLKATPGQLLLRIQIKAKNRFRIALRQFLSFGNFALIISAEYFLQRSGTIPQDQLGQNFLLILLFLGLSLLPL LDVLIAFLSKTRKLWYERVSDTEMIAKLKTNEE
Specific function: Unknown
COG id: COG4767
COG function: function code V; Glycopeptide antibiotics resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41040; Mature: 40908
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYLHSIQIGVLLFFIFLFISLIPYLIVQYRRYGRINFWRFFVNFSFILYLICAYAMTI CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FPLPPVSEVAKMTGPKQNLVPFEFVRQFILYSPFNINEPSTWLAALKDSTFIQPFFNLLL CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH TLPFGLYLRYLFKRSFKQTFVLSFLLTLSFELIQRSALFGLYPRPYRLFDVDDLMINTLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHH SLIGFGIAVTFSRFLPDLDATKAESSRVSLSRRFIAFLVDLVLIFIIGSLFLPIGYYSEL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILGLVPLVLKATPGQLLLRIQIKAKNRFRIALRQFLSFGNFALIISAEYFLQRSGTIPQ HHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCH DQLGQNFLLILLFLGLSLLPLLDVLIAFLSKTRKLWYERVSDTEMIAKLKTNEE HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure TIYLHSIQIGVLLFFIFLFISLIPYLIVQYRRYGRINFWRFFVNFSFILYLICAYAMTI EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FPLPPVSEVAKMTGPKQNLVPFEFVRQFILYSPFNINEPSTWLAALKDSTFIQPFFNLLL CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH TLPFGLYLRYLFKRSFKQTFVLSFLLTLSFELIQRSALFGLYPRPYRLFDVDDLMINTLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHH SLIGFGIAVTFSRFLPDLDATKAESSRVSLSRRFIAFLVDLVLIFIIGSLFLPIGYYSEL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILGLVPLVLKATPGQLLLRIQIKAKNRFRIALRQFLSFGNFALIISAEYFLQRSGTIPQ HHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCH DQLGQNFLLILLFLGLSLLPLLDVLIAFLSKTRKLWYERVSDTEMIAKLKTNEE HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA